| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0411 |
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| Symbol | |
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| ID | 6183124 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 366060 |
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| End bp | 367865 |
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| Gene Length | 1806 bp |
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| Protein Length | 601 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641671104 |
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| Product | GTP-binding protein LepA |
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| Protein accession | YP_001797303 |
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| Protein GI | 171463190 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0481] Membrane GTPase LepA |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR01393] GTP-binding protein LepA |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.543301 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 81 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTTAA TCCGCAATTT TTCTATCATC GCCCATATCG ATCACGGCAA ATCGACGCTT
GCTGATCGCA TTATTCAACT TTGTGGCGGT CTTTCTGATC GCGAAATGGA AGCCCAGGTG
CTCGACTCAA TGGATATTGA GCGTGAGCGT GGCATCACGA TTAAAGCACA AACTGCCGCT
TTAAATTACA AGGCCAAAGA CGGCAAGATC TACAACATCA ATCTGATTGA CACGCCAGGA
CACGTTGACT TTTCTTATGA GGTCAGCCGC TCATTATCCG CATGTGAAGG CGCCTTGTTG
GTGGTAGATG CTAGTCAGGG CGTTGAAGCG CAAACGGTTG CCAACTGTTA CATGGCGCTT
GGGTTGGGCG TTGAGGTTGT GCCAGTGCTA AATAAGATTG ATTTGCCTCA AGCAGATCCT
GAGCGTGCCA AAAAAGAAAT TGAAGATGTG ATTGGCATTG ATGCATCTGA AGCGGTGACC
TGCTCAGCCA AAACAGGCTT GGGTGTTGCT GATGTGATCG AGGAAATGAT TGCGAGAGTG
CCTCCACCAA CAGGTAATGC AGAAGATCCA TTGCAAGCCT TGATTATTGA CTCTTGGTTT
GACAACTACG TTGGCGTGGT AATGTTGGTG CGCATAGTAA ATGGCACTTT AAAACCCAAA
GATAAAATTA CCTTAATGGC CAATGGCTCT AGCCATTTGG TTGAGCATGT AGGTGTCTTT
AGTCCGAAGT CAGTTGATCG TCCAGAGTTA TCTGCGGGTC AAGTGGGCTT CGTGATTGCT
GGTATTAAAG AGTTAAAAGC GGCCAAAGTG GGTGACACCG TCACACATTC TCCTGGGCAA
CAAGGTCGAG TGCCTGCGTC CGAGCCGCTA CCAGGATTTA AAGAAGTAAA ACCTCAAGTC
TTTGCTGGTC TATATCCTGT CGAATCTAGT GAATACGACC AGTTACGCGA ATCTTTAGAA
AAGTTGCAGC TCAACGATGC TGCACTCTTG TACGAGCCTG AAGTTTCACA AGCACTTGGT
TTTGGTTTCC GTTGCGGCTT CTTGGGGTTA TTGCATATGG AGATTGTGCA AGAGCGTTTG
GAGCGTCAGT ACGGGATGAA TCTCATCACA ACTGCGCCTA CGGTGGTGTA TCAGGTAGAA
CAATCGAGTG GATCCATTAT TTCTGTGGAT AACCCATCGA AGATGCCTGA GGCCAGCAAG
ATTAATACGA TTCTTGAGCC TATCGTGACA GTCAATTTAT ACATGCCCCA AGAGTATGTG
GGATCCATTA TTACTTTGTG TGTTGGTAAG CGCGGTATTC AGATGGATAT GAATTATCTA
GGTCGTCAGG TAAAGCTTAC TTATGAGTTG CCGATGGCTG AGATTGTTTT GGACTTCTTT
GATAAGATGA AATCCATCTC ACGCGGCTAC GCCTCGATGG ATTACGAGTT CAAGGAATAT
CGTCCAGCCG ACGTGGTGAA AGTTGATATT CTGATTAATG GTGAGCGGGT TGATGCGCTC
TCTGTCATTG TTCACCGTAG TAATAGTCAG TCTCGTGGGC GCGAAGTAGT TGCAAAAATG
CGTGACATCA TTCCTCGTCA AATGTTTGAT GTAGCTATTC AGGCGGCAAT TGGTAGCAAT
ATTGTTGCTC GTGAAAACGT TAAGGCTTTG CGTAAAAACG TGTTGGCGAA GTGCTATGGT
GGCGACATCT CTCGTAAGCG TAAGTTATTA GAGAAGCAAA AAGAAGGCAA GAAGCGTATG
AAGCAAGTGG GCAATGTGGA GATTCCGCAA GAAGCTTTCT TGGCTATTTT GCAGGTGGAA
GATTAA
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| Protein sequence | MDLIRNFSII AHIDHGKSTL ADRIIQLCGG LSDREMEAQV LDSMDIERER GITIKAQTAA
LNYKAKDGKI YNINLIDTPG HVDFSYEVSR SLSACEGALL VVDASQGVEA QTVANCYMAL
GLGVEVVPVL NKIDLPQADP ERAKKEIEDV IGIDASEAVT CSAKTGLGVA DVIEEMIARV
PPPTGNAEDP LQALIIDSWF DNYVGVVMLV RIVNGTLKPK DKITLMANGS SHLVEHVGVF
SPKSVDRPEL SAGQVGFVIA GIKELKAAKV GDTVTHSPGQ QGRVPASEPL PGFKEVKPQV
FAGLYPVESS EYDQLRESLE KLQLNDAALL YEPEVSQALG FGFRCGFLGL LHMEIVQERL
ERQYGMNLIT TAPTVVYQVE QSSGSIISVD NPSKMPEASK INTILEPIVT VNLYMPQEYV
GSIITLCVGK RGIQMDMNYL GRQVKLTYEL PMAEIVLDFF DKMKSISRGY ASMDYEFKEY
RPADVVKVDI LINGERVDAL SVIVHRSNSQ SRGREVVAKM RDIIPRQMFD VAIQAAIGSN
IVARENVKAL RKNVLAKCYG GDISRKRKLL EKQKEGKKRM KQVGNVEIPQ EAFLAILQVE
D
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