| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0399 |
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| Symbol | |
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| ID | 6184260 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 355673 |
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| End bp | 356614 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641671092 |
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| Product | peptidase S49 |
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| Protein accession | YP_001797291 |
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| Protein GI | 171463178 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.673483 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 76 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAACA ACCCAAACCC GAATTGGGAA CGTCAAGCGC TGGAACATCT CTTACTCGAG
AATTTAAAGG AGACTCGTAA AGCACGTCGT TGGAAAGCGG TGTTACGAGT CCTCACTTTG
CTAGTAATTG TGAGCGTCTT ATTATCAATA TTTGATTTTC ATCTTCCTGG AAAAGGAATG
GGCGTTGAAA AACATACTGC ATTAGTCACT TTAGAGGGGG AGATTTCCTC AAGCTCAATG
GCTAATGCAA TGGATATCAA TTCGTCTTTA TTGTCTGCAT TTGAGAATGA GCATAGCGTT
GGTGTTGTTT TGCGTATCAA TAGTCCTGGT GGTTTTCCAG TTCAGGCAGG CATGATTAAT
GATGAAATTC ATCGCTTGCG TAAGCTTTAT CCGAGCAAGC CGTTTTATGT TGTGGTGGAG
GATATTTGCG CCTCCGGTGG CTACTATGTT GCAGTGGCTT CAGACCAAAT TTTGGTTGAT
AAGGCCAGCT TAGTTGGTTC TATCGGCGTG ATTATGGAGG GTTTCGGTTT CACGGGTCTG
ATGGACAAGT TAGGTGTCAC GCGTCGCATG ATTACTTCTG GATCTAACAA AGGCATGCTA
GACCCATTTA GCAAGGAGAA TCCCAAGCAA GTCGAGATGG TTAAAACTAT GATTGATGAG
ATTCATCAAC AATTTATTGC GGTGGTTAAA GAGGGGCGAG GTGATCGCTT AAAAGATATG
CCAGATTTAT TTTCTGGTCG TATTTGGAAT GGTGAGCAAG CCGTTAAAAT TGGGTTAGCG
GATGGCTACG GTACGGTAGA TACGGTTGCG CGTGATATCT TGAAGGCGCC TGATATTCTG
GACTACACCA TGAAAGAGAA TTTTGCTGAA CGGGTTGCTA AGCGCTTTGG CGCTGAGGCT
GCTGCTGGTA AGGCTTTGGT GAAGACGCCT AATCTCAAGT AA
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| Protein sequence | MENNPNPNWE RQALEHLLLE NLKETRKARR WKAVLRVLTL LVIVSVLLSI FDFHLPGKGM
GVEKHTALVT LEGEISSSSM ANAMDINSSL LSAFENEHSV GVVLRINSPG GFPVQAGMIN
DEIHRLRKLY PSKPFYVVVE DICASGGYYV AVASDQILVD KASLVGSIGV IMEGFGFTGL
MDKLGVTRRM ITSGSNKGML DPFSKENPKQ VEMVKTMIDE IHQQFIAVVK EGRGDRLKDM
PDLFSGRIWN GEQAVKIGLA DGYGTVDTVA RDILKAPDIL DYTMKENFAE RVAKRFGAEA
AAGKALVKTP NLK
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