Gene Pnec_0378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0378 
Symbol 
ID6184499 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand- 
Start bp339417 
End bp339959 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content47% 
IMG OID641671076 
Producthypothetical protein 
Protein accessionYP_001797275 
Protein GI171463162 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones74 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTATCAA ACTCAAAACC ACGCTCCTTA CTTCACACCC GAGAAATTAC CTTTCAGGGG 
TATGCAAGAG AAGATGGCTT GTGGGATATT GAAGGGCATT TAAAGGATTT CAAAACCAAT 
CCCTTTCAAA CCAGTGCAAA AGTCTGGCAG CCGGGCGAGG CATTTCACGA CATGTGGGTA 
CGCGTCACCC TAGATAAAGA ATTTGTTATC CAAGACATTG AGGCCGTCAT GGATAGACAT 
CCACACCCAG AGTGCACTGC AGTGCTTCCG CCCATGGATT CACTCATTGG GGCCCAGCTA 
GGCAAGGGTT GGCGCAAAAC AATTGATACA CATCTTGGTG GTATTAAGAG CTGTACTCAT 
TTACGCGAAC TCCTCACCAA TCTCGCTACC GCAGCCTTTC AATCAATTCC AGGGGCATTT 
TTTGACCCTA ACGGAGAGAA GCCGCCACTC TATTTAGGCA CCTGCAAAGC TTGGGACTTT 
GATGGCCCAG TAGTAATGCG TGTCTATCCC CAATTTTATC AGTGGAACAA GCCTAAGTCT 
TAA
 
Protein sequence
MLSNSKPRSL LHTREITFQG YAREDGLWDI EGHLKDFKTN PFQTSAKVWQ PGEAFHDMWV 
RVTLDKEFVI QDIEAVMDRH PHPECTAVLP PMDSLIGAQL GKGWRKTIDT HLGGIKSCTH 
LRELLTNLAT AAFQSIPGAF FDPNGEKPPL YLGTCKAWDF DGPVVMRVYP QFYQWNKPKS