| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0319 |
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| Symbol | |
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| ID | 6184061 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 286403 |
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| End bp | 287326 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641671027 |
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| Product | tyrosine recombinase XerD |
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| Protein accession | YP_001797226 |
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| Protein GI | 171463113 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.944891 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 72 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACTAATG TTGCACCAGC AATAGCCCCA GCAAGCCAGG AAGCCATTGA GCGCTTTTGT
GATGCTTGCT GGCTAGAGGA TGGCTTGGCA CAAAATAGTC TGGCCGCATA CCGCAGAGAT
CTATTGCTAT TGGCCCAGTG GCTCTATAAA GACTCTGGGG GTGACCTCTA CGGCGTTACT
GAAAAAGATC TCACTGCCTA CATTGCTTAT CGAAGGGCCG ATAAGGCAAC CACTGCTAAT
CGCCGCTTAA CTGTGTTCAA ACGTTTTTAT CGTCATGCAC TACGCATGAA TTTGGTCAAG
AGTGATCCGT GCATGGGTCT ACGCGCTGCA AAGCAAGCAC TGCGTTTTCC AAAAACTTTG
AGCGAAGATC AAGTCACTGC ATTGCTCAAT GCTCCCGATA TTGAAACTTC TCTCGGTTTG
CGTGATCGCA CCATGTTGGA GTTGATGTAT GCCAGTGGCT TACGAGTTTC TGAAATCGTT
TCTTTGAAAA CGGCAGCACT GGGTCTGAAT GAAGGTGTGG TGAGAGTAGT TAATGGCAAA
GGTGGCAAAG AGCGTTTAGT ACCATTTGGT GGAGAGGCTG GGCAGTGGTT AAGAAGGTAT
TTGGCTGAAG CGCGCACACC TTTGCTAGAA GGTAAAACAT CGGATGCAGT GTTTGTGGGT
CGTCATACTG GTACTGGTTT AACGCGGCAG GCATTTTGGG CGCTCATTAA GCGCTATGCC
ACGGTGGCTA ATATCTCGGT TGCCCTTTCG CCGCATACCT TGCGCCATGC TTTTGCCACC
CATTTGCTTA ACCATGGGGC GGATTTAAGG GTAGTGCAGT TGCTTCTGGG GCATGCTGAC
ATCTCTACGA CTCAGATCTA CACCCATGTA GCTAGGGAAA GACTCAAATC GATCCATCAG
CAGCACCATC CTCGGGGGTC TTAA
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| Protein sequence | MTNVAPAIAP ASQEAIERFC DACWLEDGLA QNSLAAYRRD LLLLAQWLYK DSGGDLYGVT
EKDLTAYIAY RRADKATTAN RRLTVFKRFY RHALRMNLVK SDPCMGLRAA KQALRFPKTL
SEDQVTALLN APDIETSLGL RDRTMLELMY ASGLRVSEIV SLKTAALGLN EGVVRVVNGK
GGKERLVPFG GEAGQWLRRY LAEARTPLLE GKTSDAVFVG RHTGTGLTRQ AFWALIKRYA
TVANISVALS PHTLRHAFAT HLLNHGADLR VVQLLLGHAD ISTTQIYTHV ARERLKSIHQ
QHHPRGS
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