Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_0315 |
Symbol | |
ID | 6184256 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | + |
Start bp | 281974 |
End bp | 283194 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641671023 |
Product | exodeoxyribonuclease VII, large subunit |
Protein accession | YP_001797222 |
Protein GI | 171463109 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1570] Exonuclease VII, large subunit |
TIGRFAM ID | [TIGR00237] exodeoxyribonuclease VII, large subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 73 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGGAAA TACCTAAGCA AATTCTCAGT GTTGGCGATC TAAACCGCGC CATTGCTGTC TCATTGGAGG ACCGCTTCGA CACCGTCTGG GTGAGCGGGG AGATTTCTAA CTTCAAATCT TATGACAGTG GGCACTGGTA TTTCTCTTTA AAGGACGAAG AGGGTCAGAT TCGGTGCGTG ATGTTCCGTG GCCGCAATGG CCAGGTAAGC TTTATGCCGC AATCTGGGGA TTTGGTGGAA GTCAGTGCCA GTTTGGGTAT GTATGTTCCG CGCGGGGATA TTCAGCTCAC CATTCAGACA TTGCGTCGTG CTGGCATGGG TGGACTTTAC GAAGCATTCT TAAAGCTCAA GGCCAAGCTC GCTAAAGAAG GTTTATTTGA TGATGAGCGT AAACGTGAGA TACCCACGCA CCCAAGATCG ATTGGCATCA TTACCTCACC ACAAGCAGCG GCTCTGAAAG ATGTCTTAAG TACTTTGGCA AGAAGAGCGC CGCAAATTCC GATTGTGATT TATCCAACGC TAGTGCAAGG CCCTGATGCT CCTGCTGGAA TTATTTCAGC GCTCAAGGCC GCTGAAGAAG AAAATGCAGT CGATGTCATT TTGTTGGTGC GCGGCGGCGG CAGTATTGAA GATCTCTGGG CATTTAACGA CGAGCTTTTG GCGTATGCAA TTGCGGACTC ATTAATACCT GTAGTAAGTG GTGTTGGTCA TGAAACCGAT TTCACGATTG CCGACTTTGT TGCCGACTTA CGTGCGCCAA CACCGACAGG CGCTGCAGAG CTAGCGGCAC CGCGCAGAGA TCAAATGCTG CAAGAGTTAA ATGCCATCAT GCAAGCATTG CTCCAACGCA TTTATCAACG CGTAGAGCGC GAAACACAAA CCCTCGATCA GTTGGCGCTC AGGCTGAGTC ATGCTCTACC CAATCCCGAT CGCATGCGCG AACAAATAGA AGGGTGGCAA AAGCGTCTTC ATCAAGCATG GTCTGTACGC ATGGAGAATT GGAGGCGTAA TCAATCACAC TACCAATCAC AGTTAGAGAT GCTGAACCCG CAACGCACTC TAGAGCGTGG ATATGCAGTC ATTTTGAACA AAGATAGCGA AGGACTGCAT GCGGTGCGCA AGCCTTCCGA ATTAAAGGTA AGTAGTGGCT ATCAAATTCG TTTGGCTGAA GGGCAAGCAG AAGTACAATT TTCAGAAGTG ATTCAAACCG AAAGCAAATA A
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Protein sequence | MSEIPKQILS VGDLNRAIAV SLEDRFDTVW VSGEISNFKS YDSGHWYFSL KDEEGQIRCV MFRGRNGQVS FMPQSGDLVE VSASLGMYVP RGDIQLTIQT LRRAGMGGLY EAFLKLKAKL AKEGLFDDER KREIPTHPRS IGIITSPQAA ALKDVLSTLA RRAPQIPIVI YPTLVQGPDA PAGIISALKA AEEENAVDVI LLVRGGGSIE DLWAFNDELL AYAIADSLIP VVSGVGHETD FTIADFVADL RAPTPTGAAE LAAPRRDQML QELNAIMQAL LQRIYQRVER ETQTLDQLAL RLSHALPNPD RMREQIEGWQ KRLHQAWSVR MENWRRNQSH YQSQLEMLNP QRTLERGYAV ILNKDSEGLH AVRKPSELKV SSGYQIRLAE GQAEVQFSEV IQTESK
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