| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0297 |
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| Symbol | |
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| ID | 6184339 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 267977 |
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| End bp | 268477 |
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| Gene Length | 501 bp |
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| Protein Length | 166 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641671005 |
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| Product | hypothetical protein |
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| Protein accession | YP_001797204 |
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| Protein GI | 171463091 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4970] Tfp pilus assembly protein FimT |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 91 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACAAA GAGGCTCAAC CTTATTAGAG TTAATGGCTG TTGTGTTGAT GATTGCTATT
GTTACGACGA TCAGCATGCC GCTATTGCAA GAACAAATTG CCGCGCGTGA GATTGATGCT
GCTGCCCGCA GGTTTATTGC GCATGCGCAC TTCGCGCGAC AGCAGGCTTT GTATACAGGT
CAGTCGGTGC AACTTGCCCC AATAAATGGA GACCTATGGG AGGATGGCTG GCTTGTACAA
AGTGGCTGCA TTGGCAGGCG GATAAGCCCA ACTTGTCAGC CTAAAATTTG GTTTTCTCAA
GGCGGTATTG AGCCTATTTA CTTTAAGGGC GGAGGCAAGC AATTTACGGA CCCACATTCG
GGCAAAAGAG GGATTTTGTT TAATGCTGCT GGGGCTGCCA AGACCAGGCA GGGCGGGTTT
GTGGCAAATC GCCTGATTTT GGGTCATCAA AGAGCCTCTC ATTTAGAAAG ACAAATGATT
TTGGGCAGTG GTGGGCGATG A
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| Protein sequence | MQQRGSTLLE LMAVVLMIAI VTTISMPLLQ EQIAAREIDA AARRFIAHAH FARQQALYTG
QSVQLAPING DLWEDGWLVQ SGCIGRRISP TCQPKIWFSQ GGIEPIYFKG GGKQFTDPHS
GKRGILFNAA GAAKTRQGGF VANRLILGHQ RASHLERQMI LGSGGR
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