| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0279 |
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| Symbol | |
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| ID | 6184349 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 255529 |
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| End bp | 256458 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641670989 |
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| Product | glucose-1-phosphate thymidylyltransferase |
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| Protein accession | YP_001797188 |
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| Protein GI | 171463075 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1209] dTDP-glucose pyrophosphorylase |
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| TIGRFAM ID | [TIGR01207] glucose-1-phosphate thymidylyltransferase, short form |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.643202 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 93 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGTAA ATCGCAAAGG CATTATTTTG GCTGGCGGAT TCGGAACTCG CCTCTATCCT
GTGACTCAGG CGGTTTCAAA GCAGCTGATG CCGGTGTATG ACAAGCCCAT GGTCTATTAC
CCGCTAAGTA CTTTAATGCT GGCTGGCATT CGGGATATTT TGGTTATCTC CACCCCACAT
GACACCCCAA GATTCTCTGA GCTCCTTGGT GATGGCTCTC AATGGGGGCT GAATATTGAG
TATTGCATGC AGCCCTCACC AGATGGTTTA GCACAAGCAT TCACACTGGG TAAAAACTTT
GTTGGAAATA ATCCAAGTGC ATTAGTACTT GGCGATAATA TTTTTTATGG CCATGAATTA
GTAGATCAAC TCAATAGTGC AAATGATCGT ACTGTTGGAG CATCGGTTTT TGCCTATCAC
GTCAATGATC CAGAGCGTTA CGGCGTGGTG GAATTTGATA AAGCTTACAA AGCATTGTCA
ATTGAAGAGA AGCCTTTGAA GCCACGCAGT AGTTATGCTG TTACCGGCTT ATATTTCTAT
GACAATCAGG TTTGTGATAT CGCCGCTTCG ATTAAGCCTA GCGCCCGTGG CGAACTCGAG
ATTACAAATG TAAATCGCGT ATATCTTGAA AAGAATGAGC TCAATGTTGA GATCATGGGC
CGAGGATTTG CTTGGCTCGA TACAGGTACT CACGATTCAT TGCTCGATGC TGCAGGCTTT
ATTGCTACCC TACAAAAGCG CCAAGGCCTT ATGGTGGCAT GCCCTGAAGA GATTGCCTAC
CGTCAAGGTT GGATCAGTGC GGATGCGGTT CAAAAGGTAG CCAATCAGCT CAGTAAAAAT
AGTTATGGCC AATACCTTGG AAAAATCTTG AGTGAATTAA ATAATTCTGC ACAACCCGTA
TCCTTGTCGC ATAAAAAAAT TATTGGGTAA
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| Protein sequence | MAVNRKGIIL AGGFGTRLYP VTQAVSKQLM PVYDKPMVYY PLSTLMLAGI RDILVISTPH
DTPRFSELLG DGSQWGLNIE YCMQPSPDGL AQAFTLGKNF VGNNPSALVL GDNIFYGHEL
VDQLNSANDR TVGASVFAYH VNDPERYGVV EFDKAYKALS IEEKPLKPRS SYAVTGLYFY
DNQVCDIAAS IKPSARGELE ITNVNRVYLE KNELNVEIMG RGFAWLDTGT HDSLLDAAGF
IATLQKRQGL MVACPEEIAY RQGWISADAV QKVANQLSKN SYGQYLGKIL SELNNSAQPV
SLSHKKIIG
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