| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0250 |
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| Symbol | |
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| ID | 6184496 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 228836 |
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| End bp | 229864 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641670960 |
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| Product | glyceraldehyde-3-phosphate dehydrogenase, type I |
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| Protein accession | YP_001797159 |
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| Protein GI | 171463046 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase |
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| TIGRFAM ID | [TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 88 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAATTC GTGTCGCAAT TAATGGTTAT GGACGTATCG GCCGCATGGT ATTGCGTGCT
TTATACGAAG ATCAAGTCAA CGGCAAACCA CGTCGTGATA TCAAGATTGT TGCAATTAAC
GCGATGGGCG ATATTGCAAT TAATGCTCAT CTAACCCAGT ACGATTCAGC GCACGGCCGC
TTCCCAGCTG AGGTTTTAGT AGACGGTGAT TGCATGGTAG TGAATGGCGA TCGCATCAAG
ATGTTCTGTA CCCGCAATCC CGCAGAAACC CCATGGGGTG AATTGGGTGT TGATTTGGTT
TTAGAGTGCA CTGGTAAGTT CACCTCTAAA GAAAAAGCCA TGATTCATAT TGAGCAGGGT
GCAAAGAAAG TGTTGATTTC TGCTCCTGGC GAAAAAGATG TGGATGCAAC AATTGTGTAT
GGCGCAAATC AAAATGTTCT CAAACCAAGC GATGTAGTTG TATCAAATGC AAGTTGCACA
ACCAACTGTT TAGCTCCGCT AGTTAAACCC TTGTTAGAAA AAATTGGTAT TGAATCGGGC
TTGATGACAA CGATTCATGC ATTTACAAAC GATCAAGTAT TGACCGATGT GTATCACAAG
GATATGCGTC GTGCACGTTC TGCTGTGACC AGCATGATCC CAACAAAGAC TGGTGCAGCT
AAGGCGGTTG GTTTAGTTCT GCCAGCATTG GCTGGGCGCT TTGATGGTTT TGCGATGCGT
GTGCCAGTGA TTAATGTTTC AGTAGTTGAC CTCACATTTG CAGCCAGTCG CGCTACTAGC
GTGGACGAAG TGAACTCTAT TCTTAAGGTT GCTAGTGAAG GCGAGCTCAA AGGTATTTTG
GGCTTCAATA CCTTGCCATT GGTTTCAATT GACTTTAACC ATGATCCGCG TCCAAGTATT
TACGATGCTT CCCAAACTCG CGTTTCTGCA GATGGCAAAT TGGTTAAGGT ATTGGCTTGG
TATGACAACG AATGGGGCTA TTCAGTCCAA ATGCTCAATG CTGCTGAAGC ATTAATGGCT
GTAAAGTAA
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| Protein sequence | MTIRVAINGY GRIGRMVLRA LYEDQVNGKP RRDIKIVAIN AMGDIAINAH LTQYDSAHGR
FPAEVLVDGD CMVVNGDRIK MFCTRNPAET PWGELGVDLV LECTGKFTSK EKAMIHIEQG
AKKVLISAPG EKDVDATIVY GANQNVLKPS DVVVSNASCT TNCLAPLVKP LLEKIGIESG
LMTTIHAFTN DQVLTDVYHK DMRRARSAVT SMIPTKTGAA KAVGLVLPAL AGRFDGFAMR
VPVINVSVVD LTFAASRATS VDEVNSILKV ASEGELKGIL GFNTLPLVSI DFNHDPRPSI
YDASQTRVSA DGKLVKVLAW YDNEWGYSVQ MLNAAEALMA VK
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