Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_0229 |
Symbol | |
ID | 6184497 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | - |
Start bp | 209141 |
End bp | 210505 |
Gene Length | 1365 bp |
Protein Length | 454 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641670941 |
Product | acetyl-CoA carboxylase, biotin carboxylase |
Protein accession | YP_001797140 |
Protein GI | 171463027 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0439] Biotin carboxylase |
TIGRFAM ID | [TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0208819 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 72 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTCGATA AGATTCTGAT TGCCAATCGG GGAGAAATTG CTCTCCGCAT CCAGCGCGCA TGCCGCGAGT TGGGAATTAA AACTGTTGTG GTGTATTCCA CAGCGGATAA GGAAGCGAAA TATGTTCGAC TTGCTGATGA AGCTGTCTGT ATCGGACCTG CACCGTCTTC GCTAAGTTAT CTTAATATGC CAGCGATTAT TTCTGCAGCC GAAGTAACGG ACGCAGAAGC AATCCACCCT GGTTATGGCT TCCTTTCTGA AAATGCTGAC TTTGCAGAAC GCGTTGAGAA ATCTGGCTTT GCATTTATCG GTCCTACCGC AGCATCTATT CATTTAATGG GCGATAAGGT TTCTGCAAAA CGCGCCATGA TCAAAGCTGG CGTTCCTTGC GTCCCCGGAT CTGAGGGTGC GCCACCTGAC AACCCAAAAG AAATTATTGC GGCCGCCAAA AAAGTGGGCT ACCCAGTCAT CATTAAAGCT GCCGGCGGTG GTGGTGGACG CGGAATGCGT GTTGTTCATA CCGAGGCACA TCTGATTAAT GCCGTTAATA TGACGCGCGA AGAAGCTGGT CGTGCTTTTG GTAATCCAGA AGTCTATATG GAGAAGTTTT TAGAAAAACC TCGTCACGTA GAAATTCAGG TGCTGGCCGA TACACATGGC AACGCTATTT GGTTAGGTGA GCGTGATTGC TCGATGCAAC GTCGTCACCA AAAAGTCATT GAAGAAGCGC CTGCTCCCGG CATTGACCGC CGCTTAATAG CCAAAATTGG TGAGCGCTGT GCAGAAGCCT GTCGCAAGAT TGGCTATCGC GGTGCTGGTA CATTCGAGTT TCTTTATGAG AATGGTGAAT TTTTCTTCAT CGAGATGAAT ACCCGTGTTC AGGTAGAGCA TCCAGTTACC GAAATGATTA CCGGCGTTGA TATTGTTCAA GAACAGATTC GTATTGCTGC CGGTTTAAAA CTCAGCTATC GCCAGAAAGA CATTGTTTTC CGTGGACATG CCATTGAATG TCGCTTAAAT GCTGAAGACC CATTCAAGTT CACGCCAAGT CCAGGCAAAA TTGGCTCATT CCATATGCCA GGAGGCCCTG GCATTCGCGT CGATTCACAC GCGTACAGTG GTTATGTAGT GCCATCCAAC TACGACTCCA TGATTGGTAA GTTAATTTCC TACGGAAATA CGCGTGAGCA AGCCATTCGC CGTATGCAAA TTGCCCTCTC CGAGATGGTG ATTGATGGCA TCACAACCAA TGTGCCACTC CATCGTGAAT TGATGCTGGA CCCCAACTTC ATTGAAGGCG GAACAAGCAT TCACTACTTG GAGCATCGCT TAGAAGAGCA AGCTGCAAGT CGCGGCAAAG CCTAA
|
Protein sequence | MFDKILIANR GEIALRIQRA CRELGIKTVV VYSTADKEAK YVRLADEAVC IGPAPSSLSY LNMPAIISAA EVTDAEAIHP GYGFLSENAD FAERVEKSGF AFIGPTAASI HLMGDKVSAK RAMIKAGVPC VPGSEGAPPD NPKEIIAAAK KVGYPVIIKA AGGGGGRGMR VVHTEAHLIN AVNMTREEAG RAFGNPEVYM EKFLEKPRHV EIQVLADTHG NAIWLGERDC SMQRRHQKVI EEAPAPGIDR RLIAKIGERC AEACRKIGYR GAGTFEFLYE NGEFFFIEMN TRVQVEHPVT EMITGVDIVQ EQIRIAAGLK LSYRQKDIVF RGHAIECRLN AEDPFKFTPS PGKIGSFHMP GGPGIRVDSH AYSGYVVPSN YDSMIGKLIS YGNTREQAIR RMQIALSEMV IDGITTNVPL HRELMLDPNF IEGGTSIHYL EHRLEEQAAS RGKA
|
| |