Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_0228 |
Symbol | |
ID | 6184314 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | - |
Start bp | 208138 |
End bp | 209124 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641670940 |
Product | ribosomal protein L11 methyltransferase |
Protein accession | YP_001797139 |
Protein GI | 171463026 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2264] Ribosomal protein L11 methylase |
TIGRFAM ID | [TIGR00406] ribosomal protein L11 methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.00278387 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 71 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTTACC GTGAACTGAT ATTCACGGTA GCAGCTGAAA CCGCAGAACC TTTGGGTGAT GCGCTTTTGG ATTTGGGCGC CCTATCTGTC ACTGTTGAAG ATGATGCCGC TGGTGGATAC GATGAAAACC CTCTCTACGA AGAACCGGGC CTATCTCCAG AAGTGCAAGC TTGGGATAGA TCGGCGGTAA CCGCCCTCTT CAATCCTGAG ATTGATACTT CGGGAAGCGC AGAATTTATT CCTGAATTAC TTGCTTCCTT GAAAGAGGTT GGCTTTAACT TAGCACCTCC TCAAGAAAAA ACAATTGAAG AGCAAGACTG GGTCCGACTT ACTCAAAGTC AATTTTCACC CATTCAGATT GGTGAACGCA TTTGGGTGGT GCCATCCTGG CACGATGCAC CAAACGATCC GAACGCAATT TGTCTCGCAG TGGATCCAGG CCTTGCATTT GGGACAGGGA GTCATCCGAC AACGCATTTA TGCCTTCTCT GGCTTGAACA ACAAAGTCAT TTAAAAAACC AAAGTCTCTT GGATTACGGA TGCGGCTCAG GAATTTTGGC AATTGCCGCA GCAAAGTTGG GCTGCAATCC GGTTATTGGT ACCGATATCG ATCCTCAAGC TATGGTGGCA GCACGCAGCA ATGCAGACAT CAATCACACT GCCGTTACTT TCGTTTTGCC AAATGAAGGC GCAACAGAAT TAGCTGCAGA AACAAAATAC GACATCGTGA TGGCCAATAT TTTAGCTAAT CCCCTGCAAG TTCTTGCTCC TGCACTGGTG AATAAGATGA AATTGGGTGG ACGTATTGTG CTGTCTGGAG TTCTTGCCCG CCAAGCAGAA GAAGTAATTG CCACTTATAG TCAATGGTTA ACACCCTCGG TCTGGAAGGA GAGTGAAGGC TGGGTTTGCC TGCACGGCAC ACTAAATCAA GACAAGCAAA ATACTGCAAG CACTGTTTTT GCTGCACCTG CTCAAAAAAA GTTTTAA
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Protein sequence | MSYRELIFTV AAETAEPLGD ALLDLGALSV TVEDDAAGGY DENPLYEEPG LSPEVQAWDR SAVTALFNPE IDTSGSAEFI PELLASLKEV GFNLAPPQEK TIEEQDWVRL TQSQFSPIQI GERIWVVPSW HDAPNDPNAI CLAVDPGLAF GTGSHPTTHL CLLWLEQQSH LKNQSLLDYG CGSGILAIAA AKLGCNPVIG TDIDPQAMVA ARSNADINHT AVTFVLPNEG ATELAAETKY DIVMANILAN PLQVLAPALV NKMKLGGRIV LSGVLARQAE EVIATYSQWL TPSVWKESEG WVCLHGTLNQ DKQNTASTVF AAPAQKKF
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