| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0200 |
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| Symbol | |
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| ID | 6184376 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 181724 |
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| End bp | 182224 |
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| Gene Length | 501 bp |
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| Protein Length | 166 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641670917 |
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| Product | peptidase A24A prepilin type IV |
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| Protein accession | YP_001797116 |
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| Protein GI | 171463003 |
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| COG category | [N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 0.267087 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTATTT TTGCTTTCCC TGAATGGATC CAAATCTTCC TGATAATGGT CTTGGTGTAT
TTGGCCTACT TTGACTTGCG CACCTTTCGC CTGCCGGATG CCATTACTTT GCCTCTCATT
CTGGCGGCCC TACTATTTAA TGGCCTAAGT AAGGACGGTT TTATCTCTTT TCAAGATTCG
ATCGCAGGCG CTATTCTTGG CTATGCCAGT CTTTGGCTTT TAAATTTTCT CTATCGAATA
CTGAAAAAAG AGGGTGGCAT TGGCATGGGG GATGCAAAGC TATTGGCTGC CTTGGGGGCT
TGGCTTGGCT GGTTCGCCTT GCCTAGCATC TTGTTATTAG CCTCCATAAC CGGACTCATT
GGCGGCCTTA TTTGGCTGCA GTGGAATAAG CAAAATCGTC GCTCGGCTTT TCCATTTGGC
CCCTTTCTTG CTATTGCTGG CATCATTGAG CTGTTATGGC CACAGACACT ACAAATCCTT
CTGCTGAGCA AGCTAGCTTA G
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| Protein sequence | MGIFAFPEWI QIFLIMVLVY LAYFDLRTFR LPDAITLPLI LAALLFNGLS KDGFISFQDS
IAGAILGYAS LWLLNFLYRI LKKEGGIGMG DAKLLAALGA WLGWFALPSI LLLASITGLI
GGLIWLQWNK QNRRSAFPFG PFLAIAGIIE LLWPQTLQIL LLSKLA
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