Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_0184 |
Symbol | |
ID | 6184505 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | + |
Start bp | 165525 |
End bp | 166400 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641670904 |
Product | Polypeptide-transport-associated domain protein FtsQ-type |
Protein accession | YP_001797103 |
Protein GI | 171462990 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1589] Cell division septal protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00000203448 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 65 |
Fosmid unclonability p-value | 0.635947 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAGCT TCATGGATCG CTTTGGTGAA ATTTTCTCTA TGTTAATAGC TCCACTTTGG AATCATTCAG AACGCATGGA GAAGCTGAGC CGTTTCCTGA TGCGTTGCTT TGTAGTGATG TTAGTGATTG GTGTTTTAGT TTGGCTTAGC CAGCGCCCAG TATTTGCCTT GAAGCAAGTG CAAATTGAGC CGGTTGCTGG TCAAGCACTG AAGCATATTA ATAAGCCCAT TGTGAAGCAG CAAGTTTTGG AAACGGTGCA AGGAAATTTC TTTAGCGTTC GCTTAGAAGA TGTGAAGCGT GGTTTTGAAA GTATGCCTTG GGTGAGACAT GCAAACGTCC GTCGTGTTTG GCCAAATGGA TTGATAGTTA GCATTGAAGA ACAAAAGTCT TTTGGCACAT GGGGTGGGGC TGATAGTCAT ACCCTGATGA ATACTCATGG GGAGATCTTT ACTGGCCGCG TTTCTGAGGT AAGTGACGAT GTTCACTTGG TTGACTTCTC TGGTCCTGCG GATGCGGGCA AAGAAGTGAT GAGCCTTTAT GAAAAAGCAA ATAACTGGTT CAAGCCATGG GGTGCAGAAG TAACCAGTCT TGCTTTAACA GAGCGCTACG CATGGCACGT CAGACTTTCT AATGGCATGA AGGTTGAATT TGGGCGTGAT GAAGAAAGCT CCGATAAAAA TTTAACAGAA GAGCGTGTAG CGCGCTTATT TAAATATTGG CCCCAAGTGC AAGAGAAGTG GGCAAATCGA ATTGATGCAG TTGATTTGCG CTATGCGAAT GGGTTTGCAG TTCATCTTGC CTCTGCAAGT TTGAAGAAGA ATGAAGTAGA TAGTAAAAAA AAGCATGCTG AAGCAATGAG GAATAGTAAT GAGTAA
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Protein sequence | MSSFMDRFGE IFSMLIAPLW NHSERMEKLS RFLMRCFVVM LVIGVLVWLS QRPVFALKQV QIEPVAGQAL KHINKPIVKQ QVLETVQGNF FSVRLEDVKR GFESMPWVRH ANVRRVWPNG LIVSIEEQKS FGTWGGADSH TLMNTHGEIF TGRVSEVSDD VHLVDFSGPA DAGKEVMSLY EKANNWFKPW GAEVTSLALT ERYAWHVRLS NGMKVEFGRD EESSDKNLTE ERVARLFKYW PQVQEKWANR IDAVDLRYAN GFAVHLASAS LKKNEVDSKK KHAEAMRNSN E
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