| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0179 |
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| Symbol | |
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| ID | 6184584 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 159129 |
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| End bp | 160751 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641670899 |
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| Product | UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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| Protein accession | YP_001797098 |
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| Protein GI | 171462985 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
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| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 69 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGATTT TAGAAAACAC CTTTGCCAAT TCAGCCTTCA TGGGCGATGA GGGCTATCAA
GCGCCAAGTC GATTCCTCAT CTTGGGCTTG GGTGAGTCTG GCGTAGCTAT GGCTAAGTGG
TGCTTGCGCA ATGGCGCAAA AGTGCGTTTA GCGGATACGC GTGATCAATC GACATTGTCT
GAGCGTCAAA ATACTTGGTT GGAAGAACTC CGTATTGCCG GACTCAACGA TATTTGTTTT
GGTCCTCTGG AAGATGACTT ACTCAAAGAG ATTGATGTCA TTGGTATTAG TCCGGGACTT
TCGCCAGTTC AAGACCCTAC TTATTCTTTC TTGGTAAAGG CTGAGGAGTC TGAAATCGAT
GTTTGGAGTG AGATTGAATT TTTTGCCCGT GCAATTTCCG CCTTAAGTCG TATGGCGCAG
GCGCAAGAGT CTAGTTATGA GGCTGCAGTA TTGGCAATCA CTGGTACTAA TGGCAAAACA
ACGACTGCTG CACTAACAGG TCAACTCTGT GAGCGCGCTG GCAAGAAGGT TGCTGTTGCG
GGAAACATTA GTCCTGCCGC TTTAGAGAAA CTGATGAACT GCTTGGATTT GGCAGACCAA
ATTGTAGACA TGTCTGATGT TTGGGTGTTG GAGCTATCCA GTTTTCAACT GGTTTACACG
CATACATTGA ACGCAACTGC AGCAACCGTA TTGAACATCA CTCAAGACCA TTTGGATTGG
CACGGTGATA TGCAGGCTTA TGCAGAGGCT AAATCAAGAA TATTTGGCGC TGATACTGTG
TGTATTTTGA ATCGTGATGA TTCTCTTGTA ATGGGACTGC TTTCTGATGA GCAGAAAGTG
GATAAGTCTA TCGTGACTTT TGGCTCTAAC CGTCCAGACG AGCAGGGCGC TTTTGGTATT
GAGCATGACT TACGTGCCGG TGGAATTGAT TGGCTGGTGT GGGCAGAGGT AGATGAAGAT
GTTGAGCCAA AGTCAAAGCG TCGGCGTAAG TCTGCAGTTG TTGAAGATGA TGAGCCGTTG
CGATTGAAAC GTCTCATTCC AGCCGACGCA TTAAGAATCC GTGGTCGACA CAACGCATTA
AATGCCTTGG CCGCGCTTGC TTTAGCTCGC GCTGTCAACT TACCAATGAA TGTGCTCTTG
CATGGTTTAC GTGATTACCA TGGCGAGCCA CACCGAGTGC AAAGTATTGC AATCGTTAGA
GATGTTGAAT ACGTCGATGA CAGCAAGGGC ACTAATGTGG GCGCTACTGT CGCCGCATTA
AATGGTTTGG GGAATAACGA ATTAGGCAAG CGAATCTGGT TAATTGCTGG CGGGGATGGT
AAGGGGCAAG ACTTTAGCCC GCTTCGTGAG CCAGCATTAC GTTTCGTGAA GGGTGCCTTC
GTAATTGGTA AAGATGGTGT TGCAATCGGC GAAGCACTAG GCGCTGGAAT ACCAATTACT
AATTGCGGCG ATCTAGTTTC TGCGGTTCAG GCTGTAGCTG GACAGGCAAT ATCTGGTGAC
ATAGTGTTGT TATCCCCAGC TTGCGCTAGT TTGGATCAAT TCTGTGACTA TAAAGAACGC
GCTCAAGTAT TTGCCGCAGA GGTCGAAGAG TTGGGAATGC GTTTTGAAGG AGTTCAGGCA
TGA
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| Protein sequence | MLILENTFAN SAFMGDEGYQ APSRFLILGL GESGVAMAKW CLRNGAKVRL ADTRDQSTLS
ERQNTWLEEL RIAGLNDICF GPLEDDLLKE IDVIGISPGL SPVQDPTYSF LVKAEESEID
VWSEIEFFAR AISALSRMAQ AQESSYEAAV LAITGTNGKT TTAALTGQLC ERAGKKVAVA
GNISPAALEK LMNCLDLADQ IVDMSDVWVL ELSSFQLVYT HTLNATAATV LNITQDHLDW
HGDMQAYAEA KSRIFGADTV CILNRDDSLV MGLLSDEQKV DKSIVTFGSN RPDEQGAFGI
EHDLRAGGID WLVWAEVDED VEPKSKRRRK SAVVEDDEPL RLKRLIPADA LRIRGRHNAL
NALAALALAR AVNLPMNVLL HGLRDYHGEP HRVQSIAIVR DVEYVDDSKG TNVGATVAAL
NGLGNNELGK RIWLIAGGDG KGQDFSPLRE PALRFVKGAF VIGKDGVAIG EALGAGIPIT
NCGDLVSAVQ AVAGQAISGD IVLLSPACAS LDQFCDYKER AQVFAAEVEE LGMRFEGVQA
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