Gene Pnec_0178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0178 
SymbolmraY 
ID6184354 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp157946 
End bp159115 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content43% 
IMG OID641670898 
Productphospho-N-acetylmuramoyl-pentapeptide- transferase 
Protein accessionYP_001797097 
Protein GI171462984 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 
TIGRFAM ID[TIGR00445] phospho-N-acetylmuramoyl-pentapeptide-transferase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.461745 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones72 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCTTAA TGTTGGCGCA ATGGTTGCAG GATGATTTCG GGTTCTTTCG GGTATTTAAC 
TACATCACTT TTAGAGCGGT GATGGCAACA GTAACTGCTT TATTAATTGG TTTGGCTGCA
GGCCCCTGGG TGATTCGTAA GTTAGCCGCC TTAAAGGTGG GTCAAGCAGT TCGAACTGAT
GGACCACAAA CCCATTTGGT GAAATCAGGC ACCCCAACGA TGGGCGGAGT TTTGATTTTG
ATTGGTATCT TTATCTCATG CATATTGTGG GCTGATCTTA GCAATCGATT TATTTGGATT
GTGATGATTG TGACCTTTGG TTTTGGTCTA GTTGGCTGGG TAGATGATTA CCGCAAAGTG
GTCTACAAGG ATCCCAAAGG AATGGCTTCG AGAGGGAAAT TTTTCTGGCA AACCTTAATT
GGTTTATTTG CCGCTATCTA TCTTGCGTTC TCAGTTTCAG AGGTGAATAA TCTTAAAGTG
CTGCAATTAT TCTATAAATG GCTCAGAAGT GGATTTGCTT TAGATCTGCC CGCAAAAACC
AATTTGTTAT TGCCGTTCAT GAAGGAAGTG AGCTACCCAT TAGGAATTAT GGGTTTCATT
ATTTTGAGTT ATTTAGTCAT TGTTGGTAGT AGTAATGCCG TGAATTTGAC TGATGGTCTT
GATGGCTTGG TCATCATGCC GGTCATTCTG GTGGGTGCTG CATTGGGTGC TTTTGCCTAT
GTAATGGGTA ATGCAATTTA TGCAAAGTAC CTTCTCTTTC CTTATATTCC GGGCGCTGGA
GAACTCATGA TTTTCTGTGG CGCTATGGGT GGAGCTGGTT TGGCATTCCT TTGGTACAAC
ACGCATCCAG CACAGGTATT TATGGGTGAT GTGGGTGCGC TTGCTTTAGG TGGTGCACTG
GGAACGATTG CCGTCATCGT TCGCCAAGAA ATTGTGTTGT TTGTGATGGG CGGAATTTTT
GTTGCCGAAA CTATTTCAGT CATGCTGCAA GTGTTTTGGT TCAAAGTCAC TAAAAAACAT
TTCGGCGAGG GTCGTCGGAT TTTCAGGATG GCGCCATTGC ATCATCATTT TGAATTAGGT
GGTTGGAAGG AAACACAAGT TGTTGTGCGT TTCTGGATCA TCACCATTCT TTTAGTCTTA
ATTGGCTTAT CTAGCTTGAA GTTACGGTGA
 
Protein sequence
MLLMLAQWLQ DDFGFFRVFN YITFRAVMAT VTALLIGLAA GPWVIRKLAA LKVGQAVRTD 
GPQTHLVKSG TPTMGGVLIL IGIFISCILW ADLSNRFIWI VMIVTFGFGL VGWVDDYRKV
VYKDPKGMAS RGKFFWQTLI GLFAAIYLAF SVSEVNNLKV LQLFYKWLRS GFALDLPAKT
NLLLPFMKEV SYPLGIMGFI ILSYLVIVGS SNAVNLTDGL DGLVIMPVIL VGAALGAFAY
VMGNAIYAKY LLFPYIPGAG ELMIFCGAMG GAGLAFLWYN THPAQVFMGD VGALALGGAL
GTIAVIVRQE IVLFVMGGIF VAETISVMLQ VFWFKVTKKH FGEGRRIFRM APLHHHFELG
GWKETQVVVR FWIITILLVL IGLSSLKLR