Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_0166 |
Symbol | |
ID | 6183062 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | + |
Start bp | 145485 |
End bp | 146234 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641670890 |
Product | Enoyl-CoA hydratase/isomerase |
Protein accession | YP_001797089 |
Protein GI | 171462976 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 79 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGATGGCA AGGTCGCCAC CATCACTTTG AATCGCCCTG AAGTATTAAA TGCATTGAAC GATCAATTGA TGGAAGAGCT TGGAGCTGCG CTATTGGCTT TTGATGCAGA TGACAACATT GGCTGCGTGA TCGTCACCGG TAGTGAAAAA GCATTTGCAG TTGGTGCTGA TATAGCTTCA ATGGCGAAAT ATGGATTGAA GGATGTTTAT CGAGGCGACT TTATTACTCG CAATTGGGAA GAGATTAAAA AAGTTCGCAA GCCAGTGATT GCTGCAGTCT CCGGCTACGC GCTTGGTGGG GGCTGTGAGT TGGCCATGAT GTGTGATACC ATCATGGCAG CTGATAATGC AAAATTTGCA CAACCTGAAG TGAAGCTGGG CATCATTCCT GGTGCACGCG GTACACAACG TTTACCGCGT GCGGTATCAA AGGCAAAAGC CATGGATCTG GCTTTGACAA GGCGCATGAT GGATGCCGCC GAGGCTGAGC GCTCCGGTTT GGTTGCAAGA ATTTTCCCGC AAGCTGACTT GCTGAAAGAG GTAAAAGTGA TTGCCAAGGG TATTGCGGAT ATGCCTCTGT TGACGGCAAT GATGGTGAAA GAAAGCATCA ACACTGCTTA TGAGACAACT CTGTCTGAAG GCATTTATTT TGAACGCCGT CTCTTTCATG CTTGCTTTGG AATGAATGAT CAGAAAGAAG GTATGGCTGC GTTCATGGAA AAACGCCCAG CCAAGTTTGC AAATTCTTAA
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Protein sequence | MDGKVATITL NRPEVLNALN DQLMEELGAA LLAFDADDNI GCVIVTGSEK AFAVGADIAS MAKYGLKDVY RGDFITRNWE EIKKVRKPVI AAVSGYALGG GCELAMMCDT IMAADNAKFA QPEVKLGIIP GARGTQRLPR AVSKAKAMDL ALTRRMMDAA EAERSGLVAR IFPQADLLKE VKVIAKGIAD MPLLTAMMVK ESINTAYETT LSEGIYFERR LFHACFGMND QKEGMAAFME KRPAKFANS
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