Gene Pnec_0166 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0166 
Symbol 
ID6183062 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp145485 
End bp146234 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content47% 
IMG OID641670890 
ProductEnoyl-CoA hydratase/isomerase 
Protein accessionYP_001797089 
Protein GI171462976 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones79 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATGGCA AGGTCGCCAC CATCACTTTG AATCGCCCTG AAGTATTAAA TGCATTGAAC 
GATCAATTGA TGGAAGAGCT TGGAGCTGCG CTATTGGCTT TTGATGCAGA TGACAACATT
GGCTGCGTGA TCGTCACCGG TAGTGAAAAA GCATTTGCAG TTGGTGCTGA TATAGCTTCA
ATGGCGAAAT ATGGATTGAA GGATGTTTAT CGAGGCGACT TTATTACTCG CAATTGGGAA
GAGATTAAAA AAGTTCGCAA GCCAGTGATT GCTGCAGTCT CCGGCTACGC GCTTGGTGGG
GGCTGTGAGT TGGCCATGAT GTGTGATACC ATCATGGCAG CTGATAATGC AAAATTTGCA
CAACCTGAAG TGAAGCTGGG CATCATTCCT GGTGCACGCG GTACACAACG TTTACCGCGT
GCGGTATCAA AGGCAAAAGC CATGGATCTG GCTTTGACAA GGCGCATGAT GGATGCCGCC
GAGGCTGAGC GCTCCGGTTT GGTTGCAAGA ATTTTCCCGC AAGCTGACTT GCTGAAAGAG
GTAAAAGTGA TTGCCAAGGG TATTGCGGAT ATGCCTCTGT TGACGGCAAT GATGGTGAAA
GAAAGCATCA ACACTGCTTA TGAGACAACT CTGTCTGAAG GCATTTATTT TGAACGCCGT
CTCTTTCATG CTTGCTTTGG AATGAATGAT CAGAAAGAAG GTATGGCTGC GTTCATGGAA
AAACGCCCAG CCAAGTTTGC AAATTCTTAA
 
Protein sequence
MDGKVATITL NRPEVLNALN DQLMEELGAA LLAFDADDNI GCVIVTGSEK AFAVGADIAS 
MAKYGLKDVY RGDFITRNWE EIKKVRKPVI AAVSGYALGG GCELAMMCDT IMAADNAKFA
QPEVKLGIIP GARGTQRLPR AVSKAKAMDL ALTRRMMDAA EAERSGLVAR IFPQADLLKE
VKVIAKGIAD MPLLTAMMVK ESINTAYETT LSEGIYFERR LFHACFGMND QKEGMAAFME
KRPAKFANS