Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_0165 |
Symbol | |
ID | 6184454 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | + |
Start bp | 144303 |
End bp | 145433 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641670889 |
Product | MltA domain protein |
Protein accession | YP_001797088 |
Protein GI | 171462975 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2821] Membrane-bound lytic murein transglycosylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 75 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTTCTA AATTTAAATT TGTTCAGTTA AGTGTATTCA TAATCTTGCT GGCTAGCTTG ATTGCCGGAT GTTCTACCCC CCCAACTCGT GGCACTGGGT ATCGCTCAAG CGGTTCTGGT GCCTCGCCAT CAAGCTATAG CTCCTCGATT GCAAGTTTTA GTGCCGTTTC ATGGCAGGCT TTACCAGGTT GGCAAGATGA TGACTTATCT CAAGCGTGGC CTGCTTGGCT AAAAAGCTGT GATGGATTGC GTAAGAAAAA TAGCGAAGTG AATTGGCGTC AGGTGTGCGC TCAAGCAAGC AATGTTTCGA GTCGTGATAC GCAATCTATT CGTAAATATT TTGAAAGCAA TTTTCAAGTC TATGAAATTC GTACTAGCTC AGGCAATGAT ACGGGCTTAA TTACTGGATA CTATGAGCCT GTGATGAATG GGTCGCTAAC CCGCACTAGT ACTTATAACG TACCGCTCTA TAGCTATCCC AATGCTTGGC GAAAGTCGAA ACCTAGTCCA GGTCCAACGC GTGCAGAGCT TATGAGTTCA GGCGTTTTAA ATGGTTCTGA AATTGCTTGG GTACAAGATC CTGTAGCGGC TGCTTCTATG CAAATTCAAG GGTCAGGAAA AATTCGTCTT GAAGATGGGC GCATCATGCG TCTTGGTTTC GCGGGCACAA ATGATCAACC TTTTAAATCA TTTGCGCAGT TGTTATTGGA TCGTAAAGAA ATTACTCGTA GCGAAGCAAC CATGCAAGGT ATTTCGCAAT GGGCCAAACG AAATCCTGAT CGCGTGAATG AAATGCTCAA CGCCAAACCT CGCTTTGTTT TCTTTAAAGA ATTACCAGGT AATGTAGCTG CAGATTTAGG ACCAAATGGG GCGCTCGGTG TTCCATTGAC TGCTGAGCGC AGTATTGCAG TAGATTTGCA GGCCTTACCT TTGGGTGCGC CTGTCTTTTT GGCAAGCACT AAACCATTAA GCAATCAGCC ATTGCAAAAG CTTGTGATGG CACAGGATAC AGGCAAAGCG ATTGTGGGCG GCGTCAGAGC AGACTACTAT TGGGGTTCAG GGGATTCTGC TGGAGAGATG GCGGGTCGCA TGAAACAAAA TGGCAGAATG TGGTTGCTGC TGCCACATTA A
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Protein sequence | MISKFKFVQL SVFIILLASL IAGCSTPPTR GTGYRSSGSG ASPSSYSSSI ASFSAVSWQA LPGWQDDDLS QAWPAWLKSC DGLRKKNSEV NWRQVCAQAS NVSSRDTQSI RKYFESNFQV YEIRTSSGND TGLITGYYEP VMNGSLTRTS TYNVPLYSYP NAWRKSKPSP GPTRAELMSS GVLNGSEIAW VQDPVAAASM QIQGSGKIRL EDGRIMRLGF AGTNDQPFKS FAQLLLDRKE ITRSEATMQG ISQWAKRNPD RVNEMLNAKP RFVFFKELPG NVAADLGPNG ALGVPLTAER SIAVDLQALP LGAPVFLAST KPLSNQPLQK LVMAQDTGKA IVGGVRADYY WGSGDSAGEM AGRMKQNGRM WLLLPH
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