Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_0136 |
Symbol | |
ID | 6184392 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | + |
Start bp | 118726 |
End bp | 120126 |
Gene Length | 1401 bp |
Protein Length | 466 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641670861 |
Product | Cytochrome b/b6 domain |
Protein accession | YP_001797061 |
Protein GI | 171462948 |
COG category | [C] Energy production and conversion |
COG ID | [COG1290] Cytochrome b subunit of the bc complex |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 57 |
Fosmid unclonability p-value | 0.153935 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCATTCC ACGAAAAAGA AGTCCCAGCA GACGCTCCGG TTGCACAGAA GGTCTTAGCT TGGGTTGATT CCCGTTTCCC TCTTACATCC TCGATTAAGG CTCACTTAAC TGAGTATTAC GCGCCGAAGA ACCTGAATTT TTGGTACTTT TTTGGTTCTT TAGCGATTGT GGTGTTGGCA TTGCAAATCA TTACCGGCAT TTTCTTGGTA GTGAACTACA AGCCTGATGC TGCTAAAGCA TTTGAGTCCG TTGAATACAT CATGCGTGAA GTTCCATGGG GCTGGATGAT TCGTTATCTG CATTCCACTG GCGCATCAAT GTTCTTCGTC GTGGTGTATT TGCACATGTT CCGTGGTTTG ATCTACGGTT CTTATCGCAA GCCACGTGAA TTGATTTGGA TTTTTGGTTG CGCAATTTTC TTGTGCTTGA TGGGCGAAGC TTTCTTCGGT TACTTGCTCC CATGGGGTCA AATGTCCTAC TGGGGCGCAC AGGTGATCGT GAACATGTTC TCCGCTATTC CATTCATCGG CCCAGACCTG TCTCTCTGGT TGCGTGGTGA CTATGTTGTT GGCGATGCAA CGCTAAACCG CTTCTTTGCA TTCCACGTTA TTGCGATTCC ATTGGTATTG ATTGGCTTGG TTGCAGCTCA CATCATTGCA TTGCATGAAG TTGGCTCAAA CAATCCAGAT GGCGTAGAAA TCAAAGAAAA CTTAGATGCA AACGGTTATC CAGTTGATGG CATTCCCTTC CATCCTTACT ACACCGTTCA TGATGTGTTC GGTCTGAGCG TGTTCTTAAT GATTTTTGCT TGCATCGTGT TCTTTGCACC AGAGATGGGT GGTTACTTCC TCGAGGCAAA TAACTTCATC CCTGCAAATC CATTGCAAAC GCCTCCGCAC ATTGCGCCGG TTTGGTATTT CACGCCGTTC TACTCTATGT TGCGCGCAAC AACTACTAAC TTCTTGTTGC CCTTGTGGAT CTTTTTGGCA GTCATTCTTG GAATGTTTGC CTTGAAATCA GACGACAAGA AAGTAAAAGG CGCGTGCGCA GCAATTGCGC TGGTATTGGC TGCTGGCTTC TACTTGTTTG ATGCTAAGTT CTGGGGTGTT GTGATCATGG GTGGTTCAGT AGTGATCATG CTCTTCTTGC CTTGGCTTGA TAAGTCACCA GTGAAGTCAA TTCGCTATCG TCCACAGTTC CATAAATATA TTTATGGCGT GTTCGTGGTG AGCTTCATTA TCTTGGGCTA TTTGGGTATT GAGCCACCAT CACCTGTATT TGAAAAGATT TCTCAGGTAT GCACTATTTA TTATCTGGGC TTCTTCTTGG CAATGCCGTT CTGGAGCACG CTTGGTACAT TCAAGCCAGT TCCAACGCGC GTTACTTTTA AGTCCCATTA A
|
Protein sequence | MAFHEKEVPA DAPVAQKVLA WVDSRFPLTS SIKAHLTEYY APKNLNFWYF FGSLAIVVLA LQIITGIFLV VNYKPDAAKA FESVEYIMRE VPWGWMIRYL HSTGASMFFV VVYLHMFRGL IYGSYRKPRE LIWIFGCAIF LCLMGEAFFG YLLPWGQMSY WGAQVIVNMF SAIPFIGPDL SLWLRGDYVV GDATLNRFFA FHVIAIPLVL IGLVAAHIIA LHEVGSNNPD GVEIKENLDA NGYPVDGIPF HPYYTVHDVF GLSVFLMIFA CIVFFAPEMG GYFLEANNFI PANPLQTPPH IAPVWYFTPF YSMLRATTTN FLLPLWIFLA VILGMFALKS DDKKVKGACA AIALVLAAGF YLFDAKFWGV VIMGGSVVIM LFLPWLDKSP VKSIRYRPQF HKYIYGVFVV SFIILGYLGI EPPSPVFEKI SQVCTIYYLG FFLAMPFWST LGTFKPVPTR VTFKSH
|
| |