| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0096 |
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| Symbol | |
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| ID | 6184127 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 91412 |
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| End bp | 92200 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641670832 |
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| Product | protein of unknown function DUF140 |
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| Protein accession | YP_001797032 |
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| Protein GI | 171462919 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0767] ABC-type transport system involved in resistance to organic solvents, permease component |
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| TIGRFAM ID | [TIGR00056] conserved hypothetical integral membrane protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0000150492 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 69 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGCAC TACTTAATCT CTTTGGTGAT CTTGGATTTT TTATTCGCCG TAATTTAAGT
AGCCTTGGCC TGGCTGCCCG CATGTTAGTC GCGGTAGTCT TCCGCTCAGG CTTCTTGCTC
AAAAGACCGC GCTTGGTGAT TGATCAAATT CTATTTGTTG GCAACCACTC GTTTGTCATC
ATTGCAGTCT CTGGATTATT TGTTGGTTTT GTTTTGGGTT TGCAGGGTTA CTACACCTTG
AATCGTTATG GATCTGAGCA AGCACTTGGC TTGTTGGTGG CACTCTCTTT AACTCGCGAA
TTAGGTCCAG TGATTACCGC TTTATTGTTT GCTGGTAGAG CCGGCACTTC ATTAACTGCA
GAAATTGGCC TGATGAAAGC CGGTGAGCAG TTGACTGCTA TGGAGATGAT GGCGGTTGAT
CCCTTGGGGC GTGTGATTGC ACCGCGACTC TGGGCGGGCA TTATTTCGAT GCCAATCCTG
GCAACGATTT TTACTGCTGT AGGTATTTTG GGGGGCTACT TGGTTGGCGT CCCATTAATT
GGCGTGGATT CAGGCGCCTT CTGGTCTCAG ATGCAGGGTG GCGTGGATCT GTTTTCGGAT
ACTGGCAACG GCCTGATTAA AAGCATGGTG TATGGTGTGG CAGTAACTTT TATTGCCCTT
TACCAAGGTT ATGAATCTAG GCCTACGCCT GAAGGTGTTT CGCAAGCGAC TACTCGTACG
GTGGTGATTT CTTCTTTATC GGTCTTAGCG TTGGATTTCT TGCTGACCGC AATGATGTTC
TCAAATTAG
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| Protein sequence | MAALLNLFGD LGFFIRRNLS SLGLAARMLV AVVFRSGFLL KRPRLVIDQI LFVGNHSFVI
IAVSGLFVGF VLGLQGYYTL NRYGSEQALG LLVALSLTRE LGPVITALLF AGRAGTSLTA
EIGLMKAGEQ LTAMEMMAVD PLGRVIAPRL WAGIISMPIL ATIFTAVGIL GGYLVGVPLI
GVDSGAFWSQ MQGGVDLFSD TGNGLIKSMV YGVAVTFIAL YQGYESRPTP EGVSQATTRT
VVISSLSVLA LDFLLTAMMF SN
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