Gene Pnec_0072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0072 
Symbol 
ID6183298 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp68744 
End bp68860 
Gene Length117 bp 
Protein Length38 aa 
Translation table11 
GC content44% 
IMG OID641670814 
Productribosomal protein L36 
Protein accessionYP_001797014 
Protein GI171462901 
COG category 
COG ID 
TIGRFAM ID[TIGR01022] ribosomal protein L36, bacterial type 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.346676 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.00000000224285 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAGTTT TAGCATCCGT TAAGTGTATT TGCAGAAATT GCAAGATCAT TAAGCGCAAA 
CGCGTTGTGC GTGTGATCTG TTCTTCAGAC GCACGTCATA AGCAGCGTCA AGGCTGA
 
Protein sequence
MKVLASVKCI CRNCKIIKRK RVVRVICSSD ARHKQRQG