| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0061 |
|---|
| Symbol | rplX |
|---|
| ID | 6184107 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010531 |
|---|
| Strand | + |
|---|
| Start bp | 63402 |
|---|
| End bp | 63710 |
|---|
| Gene Length | 309 bp |
|---|
| Protein Length | 102 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 641670803 |
|---|
| Product | 50S ribosomal protein L24 |
|---|
| Protein accession | YP_001797003 |
|---|
| Protein GI | 171462890 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0198] Ribosomal protein L24 |
|---|
| TIGRFAM ID | [TIGR01079] ribosomal protein L24, bacterial/organelle |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.000000000762997 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1.34485e-17 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGA TTCGTAAAGG TGATTCCGTA GTTCTGTTGA CTGGCCGCGA TAAGGGCAAG
CAAGGAATTG TTACTGCCGT TCTCGAGAAC AAATTAGTGA TCGAAGGCGT AAATATTTAT
AAAAAGAGCG TTAAGCCAAA TCCGGCAGCC GGTGTTACTG GCGGCATAAT TGACAAGACG
ATGCCTGTTC ACATTTCTAA TGTGGCTTTG GTTGACGGTA ACGGCAAACC ATCACGTGTT
GGTATCAAAC TCGTTGACGG TAAAAAGCAG CGTTTCCTCA AAACCACTGG CGCAACTTTA
AGCGCATAA
|
|---|
| Protein sequence | MKKIRKGDSV VLLTGRDKGK QGIVTAVLEN KLVIEGVNIY KKSVKPNPAA GVTGGIIDKT
MPVHISNVAL VDGNGKPSRV GIKLVDGKKQ RFLKTTGATL SA
|
|---|
| |