| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0055 |
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| Symbol | rplV |
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| ID | 6184396 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 60774 |
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| End bp | 61109 |
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| Gene Length | 336 bp |
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| Protein Length | 111 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641670797 |
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| Product | 50S ribosomal protein L22 |
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| Protein accession | YP_001796997 |
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| Protein GI | 171462884 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0091] Ribosomal protein L22 |
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| TIGRFAM ID | [TIGR01044] ribosomal protein L22, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000000000185707 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 6.04207e-20 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGATGATGG AAGTCAAAGC TATTCACAAG GGTGCCCGCA TTTCTGCGCA AAAGACTCGT
TTGGTCGCCG ACCAAATTCG TGGTTTGCCG ATTGCTCGCG CATTAAACAT TTTGAACTTC
AGCCCCAAAA AAGCTGCCTT CATTGTGAAA AAAGTTGTTG AGTCCGCAGT GGCCAACGCT
GAACACAATA AAGGCGCTGA CATTGATGAG CTCAAGGTTT CAGCAATTAT TGTTGATAAA
GGTACTTCAT TGAAGCGCTT TACTGCACGC GCCAAGGGTC GTGGCAATCA AATTGAAAAA
CAAACATGTC ACATTAGCGT GACCTTGAGT AACTAA
|
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| Protein sequence | MMMEVKAIHK GARISAQKTR LVADQIRGLP IARALNILNF SPKKAAFIVK KVVESAVANA
EHNKGADIDE LKVSAIIVDK GTSLKRFTAR AKGRGNQIEK QTCHISVTLS N
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