| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0049 |
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| Symbol | rpsJ |
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| ID | 6184142 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 57529 |
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| End bp | 57840 |
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| Gene Length | 312 bp |
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| Protein Length | 103 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641670791 |
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| Product | 30S ribosomal protein S10 |
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| Protein accession | YP_001796991 |
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| Protein GI | 171462878 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0051] Ribosomal protein S10 |
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| TIGRFAM ID | [TIGR01049] ribosomal protein S10, bacterial/organelle |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000000000291739 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 2.20907e-25 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGCAAAACC AAAAAATTCG TATTCGCCTT AAAGCATTTG ATTACCGTTT AATCGACCAG
TCTGCAGCTG AAATCGTTGA TACAGCTAAG CGCACTGGTG CTGTTGTTAA GGGCCCAGTC
CCTTTGCCAA CCCGTATTGA GCGCTTTGAT ATCTTGCGTT CACCGCACGT GAATAAGACA
TCTCGTGATC AGTTAGAGAT CCGTACCCAT CTCCGTTTAA TGGATATCGT TGATCCTACC
GAGAAAACTG TAGATGCCTT GATGAAATTA GACCTCCCAG CAGGTGTGGG AGTCGAAATT
AAGTTGCAGT AA
|
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| Protein sequence | MQNQKIRIRL KAFDYRLIDQ SAAEIVDTAK RTGAVVKGPV PLPTRIERFD ILRSPHVNKT
SRDQLEIRTH LRLMDIVDPT EKTVDALMKL DLPAGVGVEI KLQ
|
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