| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0016 |
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| Symbol | |
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| ID | 6182886 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 16688 |
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| End bp | 17563 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641670750 |
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| Product | F0F1 ATP synthase subunit A |
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| Protein accession | YP_001796960 |
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| Protein GI | 171462847 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0356] F0F1-type ATP synthase, subunit a |
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| TIGRFAM ID | [TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000000260212 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.000221362 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCTAGCG AAGTAAACCA AGCCCACGGG GCAGCAGAAC AGATGACGCC AACGGCGTAC
ATTTCTGAGC ATTTACAAAA CCTAAATAAT ACAGGCGGAC CACAGTCGTC CATCATTGAT
TTCAGCATCA TCAATTTAGA CACGATTTTT TGGGCATCTT TTATGGGCTT CCTCACCGTA
TTTATTTTGT TGATCGTCGC GCGTCGCGCA ACTCCAGGTG TGCCAGGTCG TTTCCAATGT
TTCGTAGAAA TGATTGTTGA AATGGCAGAG ACACAATCTA AGAGCATTGT TCATGGCGAT
CGTTCTTACA TTGCCCCGCT TGCTCTATTT GTATTCTTTT GGATTATCTT GCTGAACACC
TTGGACTTGG TGCCGGTGGA CTGGGTTTTG GGCGTGAACC ATTTCATTGA AAGTTTTGGC
GTACACGTTC CACACCATAA GGTTGTTCCA ACAACCGATC TCAATGCAAC GATGGGCATG
TCTATGTCTG TCTTGCTTTT GGTTTTCTTT TATAGCTTCA AAGTAAAAGG TTTAGGCGGC
TTTTTGCATG AACTCATTTC TGCCCCATTC GGCGCGAAAT GGTATTTGGC CCCATTCAAC
CTCGCTTTGA ACATCATCGA ATATCTTGCA AAAGGCGTTT CACTGGGCAT GCGACTTTTC
GGTAACATGT ATGCCGGTGA GCTTGTGTTC TTGTTGATCG CATTGCTTGG TAGCGTGTGG
ACATTTAATT TAGATTTATC CCTGTTCGGA TTGGTGGGTC ATGTTATTGC TGGATCAGCA
TGGGCCATCT TCCACATTTT GGTTATTTTG TTGCAAGCTT TTATTTTCAT GATGTTGATC
TTGGTCTACA TCGGGCAAGC GCATAGCCAT CACTAA
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| Protein sequence | MSSEVNQAHG AAEQMTPTAY ISEHLQNLNN TGGPQSSIID FSIINLDTIF WASFMGFLTV
FILLIVARRA TPGVPGRFQC FVEMIVEMAE TQSKSIVHGD RSYIAPLALF VFFWIILLNT
LDLVPVDWVL GVNHFIESFG VHVPHHKVVP TTDLNATMGM SMSVLLLVFF YSFKVKGLGG
FLHELISAPF GAKWYLAPFN LALNIIEYLA KGVSLGMRLF GNMYAGELVF LLIALLGSVW
TFNLDLSLFG LVGHVIAGSA WAIFHILVIL LQAFIFMMLI LVYIGQAHSH H
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