Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_0015 |
Symbol | |
ID | 6183814 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | + |
Start bp | 15195 |
End bp | 16085 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641670749 |
Product | parB-like partition protein |
Protein accession | YP_001796959 |
Protein GI | 171462846 |
COG category | [K] Transcription |
COG ID | [COG1475] Predicted transcriptional regulators |
TIGRFAM ID | [TIGR00180] ParB-like partition proteins |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000000218674 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 0.000314098 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGTTGCCA TTAAGAAAAA AGGTTTGGGA AGAGGGCTCG AAGCTTTGCT TGGAGAAAAA ACGCAACAAG CAAACCCTGC CGCCGAGATT AATCGTTTGC CATTATCAGC GTTGCAAGCA GGCAAATACC AACCGCGCCA AAAAATGGAA GCGGCCGCAT TGCAAGAGTT GGCAGAAAGC ATTCGTGAGC AAGGTGTTAT GCAGCCATTG TTGGTTCGTT TGGTGGCTCC TAGTAAATAT GAAATTATTG CAGGCGAAAG ACGTTTTCGC GCGGCAACAA TTGCTGGTCT AAAAGAAGTT CCGGTTTTAG TTTCTGGTGC AGATGATCAA GCTGCCGCAG CAATGGCTTT GGTTGAGAAC ATGCAGCGCG AGGATTTAAA TCCTCTTGAA GAGTCTCAAG GCTTGGCTCG GTTGATAGAG GAATTTGGCT TTACACATGA GCAGGCCGCA AAAGCAGTGG GCAAATCCCG CAGCGCCATT ACTAATTTGC TGCGCCTTGC CCAGCTGGCA AAGCCAGTCC AGTCCATGCT GCTTGCTGGC GACATTGATA TGGGCCACGC CCGTGCGCTA CTCCCCCTTC CAGGTTCTAG CCAGGTTGCA CTAGCTCAAA GAGTCTCCGC TCAGGGCTTA TCTGTGCGCG AAGCGGAAAG AATGACTGCG GCTTTGGTCA TTGCTGGCGG TCAAATTGGT GACAAAAAAG CTAAAAGTAA GCCTGGATCC TCTTCTTCAA GCGCCGATCC TGATATGCAG CGTTTAACGC AAGAAATCGC AGACTTAATA GGGTTGAGCA CCGAATTTAA GCTCAAAGGC AAAGGCGGTG AGCTCAGAAT TCACTATAGC CAATTTGATG AGCTTGATTC CTTATTAAAA AAGTTGGGTA TTGGGTCATA A
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Protein sequence | MVAIKKKGLG RGLEALLGEK TQQANPAAEI NRLPLSALQA GKYQPRQKME AAALQELAES IREQGVMQPL LVRLVAPSKY EIIAGERRFR AATIAGLKEV PVLVSGADDQ AAAAMALVEN MQREDLNPLE ESQGLARLIE EFGFTHEQAA KAVGKSRSAI TNLLRLAQLA KPVQSMLLAG DIDMGHARAL LPLPGSSQVA LAQRVSAQGL SVREAERMTA ALVIAGGQIG DKKAKSKPGS SSSSADPDMQ RLTQEIADLI GLSTEFKLKG KGGELRIHYS QFDELDSLLK KLGIGS
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