| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4988 |
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| Symbol | |
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| ID | 4686028 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008762 |
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| Strand | - |
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| Start bp | 17280 |
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| End bp | 18218 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639826816 |
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| Product | plasmid replication initiator protein-like protein |
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| Protein accession | YP_973978 |
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| Protein GI | 121583559 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG5534] Plasmid replication initiator protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 80 |
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| Plasmid unclonability p-value | 0.862062 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGAAG ACAAGAATAC CAAAAAGCGC ACCGAGGTAG AAATTCAGGC AATGCTTGCA
AAACTGCGAG CAAAAGGCAA AGAAAACCAG AACGAAATAC GCGCAGCGAT TGTTGAAGAC
CTGAAAAAAT TCAAAGAGCC GCCACCCTCC GTCTTGGCAC CAGTGAAACA TCTCCAAAAA
GATTTTTTCA TCGCCGACAT TTTTGATACA GCGATCAAAG ACGACATGGC AAGCATGGAA
CATCCATTGT TTGCACTCAA AGCCGGTGAC ATGCGCGTGC GTGTGTACGA GCGAAACGGC
AACAGCGTGA CGATCAAGCC AGGTTCTGAC GGCTGCGCCA CGATTCACGA CAAAGACGTT
TGGATTTACT GCACGAGCCA ACTTATCGAA GCGATGAATC GTGGGCGTGA TGACGTTAGT
CGCACAGTGA GATTCACGGC GTACAACTTT CTTGTCACGA CAAATAGACC TGTTGATGGC
GACAGTTATA AGCGCATGGG TGACGCATTG GCAAGGCTGC GCGGCACGAG CATTGAAACA
AACATCATCA CAGATGGACA ACGTGAGAGA GCCGGTTTTG GTTTGATCGA CTCCTGGCGA
GTTATTGAAA AAACAGCAGG CGGACGGATG GTTGCCGTTG AAGTAACTTT ATCGGACTGG
CTGTATCGAT CAATTAAAGC AAAACAAGTG CTAACGCTAT CGCCGGACTA TTTCAGAATC
CGTAAGCCAG CAGATCGACG CATGTACGAG CTGGCTAGAA AGCACTGTGG CGCCCAACGG
CAATGGCAAT GCACGATTAA AACGCTGTAC GAAAAAAGCG GCAGCACTGC AAATTTGCGA
GAGTTTCGCC GCACAGTAAA AACGCTTGTC GAGTCCGATG AGTTGCCAGA CTACAAGGTC
GGCATGGTTG ACGATATGGT GACATTCATT CGCCGGTAG
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| Protein sequence | MAEDKNTKKR TEVEIQAMLA KLRAKGKENQ NEIRAAIVED LKKFKEPPPS VLAPVKHLQK
DFFIADIFDT AIKDDMASME HPLFALKAGD MRVRVYERNG NSVTIKPGSD GCATIHDKDV
WIYCTSQLIE AMNRGRDDVS RTVRFTAYNF LVTTNRPVDG DSYKRMGDAL ARLRGTSIET
NIITDGQRER AGFGLIDSWR VIEKTAGGRM VAVEVTLSDW LYRSIKAKQV LTLSPDYFRI
RKPADRRMYE LARKHCGAQR QWQCTIKTLY EKSGSTANLR EFRRTVKTLV ESDELPDYKV
GMVDDMVTFI RR
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