Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_4905 |
Symbol | |
ID | 4685747 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008759 |
Strand | + |
Start bp | 80664 |
End bp | 82586 |
Gene Length | 1923 bp |
Protein Length | 640 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639826547 |
Product | hypothetical protein |
Protein accession | YP_973711 |
Protein GI | 121583275 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.218952 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAGA TTGTTGCCGC ACTTGTCAGC GGGTTGCTGT GTGCCTGTGC GCACGCTCAG ATTCAGTGGG AGGTCGAGAA CCGATTTCCG TTCTTCACTA AGGAGGCCTT CAGGTCTCTC GAAGATGCGG TGGGTGACAA CCCTATTAAC CTAGAGACCC GGATAACCCA GCTTAAGCTG CGCGACCAAG TCAATCACCT CAAAGAGTCA GCATGGAATC CCGAGACCGG AAAGCACGAT GCCGCTCGTA TCCTTTCACC CTCCGTCAGG ATTAGTGGCA GAACTGCCTG GCTCGACCCC GCGTGTGAAT GGAGTCTGAC CAACAGCGCC GGCCAATCAG TCCAAAAGGT CAGCGGGCCT TGCCAAGTAG GACCCTGGCT TGAAGCGACC ATCGGAGAAC CCACCACACT GTCGGTGCGC AAGCCCACAG GCGAGCAGTT CGAACAAGCC GTTCTGGTAA AAAAACGCTT GGTCGTAGCG ATAGGTGACT CCTTCGCATC GGGAGAGGGC AACCCCGACT ATTCCGCGAA GTTCGAATGG TCACCTGACA GTAGCCTTTT GAAGCGACCT GCACACACCT GGATGCTGAA TCCAAACGAC ATCAGGAAGC TGAAAATTGT AAATGCGCAG TGGTTGGACA CCAAGTGCCA TCGGTCCATC ATGGCCTGGC CTTCGCTTTA TGCCTTGCAG CAGGCCCTCA CCAACAAGGA TACCGTTGTC CAGTTCGCGT CGTTTGCTTG CTCCGGGGCC GAAATCATGG ATGGCTTCTA CCTTCCGCAG AAAAACACTC CGGGAACCGC CGGGACGAAA CTCAGCCCAA GCCGCGAGGA CAAATTCTTA AAATTCTCCC AGCAGGAAGC GCTAGCCCGC TTCCTTTGTC CTACAAACCC CGTTCCGACA GACCTCGAAG TATCGAGAAA AATCGCGCAA ACCTATCTCA ACCCCTACTA CAACAACAAT GAAAATGATG CCAAGAAGGT GACGATGTGG AAGTGCGCTG CGCCGCTGAA ACCCGATGAA CTTCTCGTCC TCTTCGGTGG CAACGACACC AAGTTCAGCG GTATTGTGAA GTACGTGTTC CACCCGGCCA AACTCGCTTA CAACTTGCCT GTAGTTGGCT TCTTGATGGA CAAAGCCATC AAATTGGCGC TTACACCAGT GCCCCCGGAG GATGCGAAGA AATACCTCCA GCTCTTGCCA GAAAACTACG GATATCTTCG AGCAGGTCTT GAAGGATTCG TAGAGCAAGG AAAAACAAAG GTCCGGATGC TGCAGTACCC CGACCCGGCG TCGAACGACC TGGCACACAA TGAAGCGGCC AAGGAGCTAC GCGCCTGCCA GCTCCGGACT GGCGACGCAA ACCGCCCAAT ACAGCAAATG ATTGCGTCGC AGCTGCCCGG CCCCTTCAAG AACGAAGGCG CCTGGTACGG CATCAGCCCG AAGAAGCTCA CGCAAATTCG AGAACAGTAC GTCGACCCGC TGCGAAAGCT TCAGTTGAGC AGCACCAGTG AATTCGGCTG GGAGCTTGTG GACTCTTTGC CCGCATTCCA TAACCACGGG ATTTGCGGCG GTACGCTTGA GTGCGAATCT GCGGGGGAGA ACTGCAGGAA CTCTGACCGT GTCCGTTGGG CATATTTCAC CGACATCCAG TATGTGCGGG CACCAAACAG TTGCCCCATG AAAAATCTTC TTGTGTTCAA CCCCTATGAC GACCAGCAAG GGCGCGGGTT GCGCCTTGCG AATGACGCGG CGCTTGTCGC CGCCCGCGTA GCCCCCAACG GTAGCCTGTA CTTGGACTGG GTAAATAACA TGGCCCATCC GACTGCCGCT GCCCATGCGC GTGTTGCAAG CCTTGTTGCC GGCAAGCCCT TGGTTCCTGC TGCGCCCGAG CCAGCTCAGC CATGGCTGGC CTGCGCCAAT TGA
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Protein sequence | MKKIVAALVS GLLCACAHAQ IQWEVENRFP FFTKEAFRSL EDAVGDNPIN LETRITQLKL RDQVNHLKES AWNPETGKHD AARILSPSVR ISGRTAWLDP ACEWSLTNSA GQSVQKVSGP CQVGPWLEAT IGEPTTLSVR KPTGEQFEQA VLVKKRLVVA IGDSFASGEG NPDYSAKFEW SPDSSLLKRP AHTWMLNPND IRKLKIVNAQ WLDTKCHRSI MAWPSLYALQ QALTNKDTVV QFASFACSGA EIMDGFYLPQ KNTPGTAGTK LSPSREDKFL KFSQQEALAR FLCPTNPVPT DLEVSRKIAQ TYLNPYYNNN ENDAKKVTMW KCAAPLKPDE LLVLFGGNDT KFSGIVKYVF HPAKLAYNLP VVGFLMDKAI KLALTPVPPE DAKKYLQLLP ENYGYLRAGL EGFVEQGKTK VRMLQYPDPA SNDLAHNEAA KELRACQLRT GDANRPIQQM IASQLPGPFK NEGAWYGISP KKLTQIREQY VDPLRKLQLS STSEFGWELV DSLPAFHNHG ICGGTLECES AGENCRNSDR VRWAYFTDIQ YVRAPNSCPM KNLLVFNPYD DQQGRGLRLA NDAALVAARV APNGSLYLDW VNNMAHPTAA AHARVASLVA GKPLVPAAPE PAQPWLACAN
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