Gene Pnap_4890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4890 
Symbol 
ID4685657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008759 
Strand
Start bp62249 
End bp62722 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content52% 
IMG OID639826532 
ProductXRE family transcriptional regulator 
Protein accessionYP_973696 
Protein GI121583260 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCATGACC GAGGTTTTCC ACATGCGTTC AATAATACAA TAAAACTTAT TTATATTGAT 
AGATTTCATT TTATTATGGC CAAACCTAAT CAAGTTATGG AAACAACCTA CGGACTACGG
CTGAAACAAG CCTATAAGCA TGCTGGGCTC ACGCAAGTCC AGCTTGCCAG TGCGGCGGGC
CTGTCCCAGG CAGCAATTTC GGAGGCCTGC CGAGTCGGGA CGGGCAGTGC CTATACGGTG
CAGTTTGCGC GGGCGTGCGG CGTGGATGCG TTCTGGTTGG CTACGGGCGA TGGCGAGATG
GAGCCAGCTA CGCTAAGCCC GCGAGCGCTG TATATAGCGC GCGAACTTGA CCGAAAGGAG
CCGCCTGAGC AACGGGACCG GCTTTATGCG ATTTTCATGC AGCTACTTGA TTTTTCTGCG
AACGATACCG TGCCCACAAA GCACTCCGGG GCAGTATTAG GAAATGGAAT TTAA
 
Protein sequence
MHDRGFPHAF NNTIKLIYID RFHFIMAKPN QVMETTYGLR LKQAYKHAGL TQVQLASAAG 
LSQAAISEAC RVGTGSAYTV QFARACGVDA FWLATGDGEM EPATLSPRAL YIARELDRKE
PPEQRDRLYA IFMQLLDFSA NDTVPTKHSG AVLGNGI