Gene Pnap_4877 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4877 
Symbol 
ID4685811 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008759 
Strand
Start bp52493 
End bp53179 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content41% 
IMG OID639826519 
Producthypothetical protein 
Protein accessionYP_973683 
Protein GI121583247 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value0.899225 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATACTCT CACTAACTCT CTCGGCATGC GTCAGCAACC CACCTCGCCC AGTTGTTCAA 
ATAGTCAAAT ATGACCTTCG AGTAAATCAG TCGAGCCGAG ATGAAATCTT CTCTGACGAC
GTTGGAATTA GTCTCAAGCC AATAATGCTT GAAAAGGCTG TTACTACCGA GAGCTTATTT
GCTTCCTATA ATTATTGGAA TCCCAGCAAT CCCAAGCAAA ATGGCAAAAT TAGAAGCATT
CTAGTTAGTC TTCCAGTCTT TGAAGTTCAA GTAACAAATA CAAGCGGACA GGCCGTCAGC
TTTCAAAAAG TGGCCATTCG TTTGGTTGAC GATGCAGGCA ATAGCTATCA GGCTCAACTC
AAACAAGACA TCATAGATTT TGCTGGTACA CAACTCGATT CCATGCAAAG CCGTGGATGG
GCAATGGACA GAGCAGTAGC ACTGGGAGCA GCGAGAAACT TAAAACTGCT TGATAAAAAC
TATGAGAGTT TGCCTGGCAT TATCGAGAAA AGAATACTCT CTTTTGACAT CGGAAACATC
TCTAATGACA ACGCGTACAG AGAAATGTTT AAAAATACCA AGTACGTACG AGCAATGATA
TATAACGTTC CTGTCAAGTT TGACCAAGCG GGAAATGTTA CGAAAGTAGC CAAATTTGAT
TTCTTGTTTG ATGTTATCAA AAAATAA
 
Protein sequence
MILSLTLSAC VSNPPRPVVQ IVKYDLRVNQ SSRDEIFSDD VGISLKPIML EKAVTTESLF 
ASYNYWNPSN PKQNGKIRSI LVSLPVFEVQ VTNTSGQAVS FQKVAIRLVD DAGNSYQAQL
KQDIIDFAGT QLDSMQSRGW AMDRAVALGA ARNLKLLDKN YESLPGIIEK RILSFDIGNI
SNDNAYREMF KNTKYVRAMI YNVPVKFDQA GNVTKVAKFD FLFDVIKK