| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4798 |
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| Symbol | |
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| ID | 4685990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008761 |
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| Strand | + |
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| Start bp | 39355 |
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| End bp | 40350 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639826787 |
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| Product | phage integrase family protein |
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| Protein accession | YP_973949 |
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| Protein GI | 121583523 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 66 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 121 |
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| Fosmid unclonability p-value | 0.586427 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGGCG CCGCACCCCC TCCCCTGAAG ACCCGCGACC TGGCAGCGCC CGCCCTGGCG
CGCGCGCTGA CCGCGCCCGA GTTCGCCCGC CTGGCCGAGG TGCCGCCCGA GGCCCAGTGG
TTTGCGAATC TCGACAGCGC CCAGACAAGG CGCGCCTACC AGGGCGACCT GCGCGCCTTC
ATGGCGTTCA CCGGCATTGT TCAGCCCGAG GAGTTCCGCG CCGTCACGCG CGCCCACATC
CTGGCCTGGC GTGCCGAACT CGAAAAACAA AACCTCGCTG GCGCCAGCAT CCGGCGCAAG
CTTGCCGCCC TGGCTTCTTT ATATGACTAC CTGTGCGAGT CCAATGCCGT CACGCACAAC
CCGGTGCGCG GCGTGAAGCG CCCGAAGGCC GAAACGAGTG AAGGCAAGAC GCCGGCGCTC
GGCGACGCGC AGGCGCGCGC GCTGCTCGGC GCACCTCCAA GCGATACGCT CAAGGGCAAG
CGCGACCGGG CGATCCTGTC GGTGCTGCTG TACCACGCGC TGCGCCGCGA AGAACTCACC
AAGCTGCTCG TGAAGGACTT CGCCCAGGAG CGCCGGGGCG TGCCCCATTT GCGCGTGCAG
GGCAAGGGCG GCAAGCTGCG CTACCTGCCG GCGCACCCGC ACTCGCTGCG ACTGGTCGCC
GAGTACCTGG CCGCCAGCGG CCATGGCCAG GAAGCGGACA GCCCGCTGTT CCGGCGCACC
CGCGCGCCCC GGGCCGGCGC GCTGGCCAGC GCCCTCACGC CGGGCAGCGT GTACGCCGAT
GTCGTGGTGC GCTACATGGC CCAGGTGGGG ATTGCCGGCG AGAACATGGG GCCGCATGCG
CTGCGCGCCA CGGCCGCGAC CAACGCGCTG GAGCACCAGG CCGACATCGC CAAGGTCCAG
GAGTGGCTCG GGCACGCGAG CATCAGCACG ACGCGCGTGT ATGACCGGCG CGGCTCCCGG
CCCGAGGATT CACCGACCTT CAAGGTGGCT TATTGA
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| Protein sequence | MPGAAPPPLK TRDLAAPALA RALTAPEFAR LAEVPPEAQW FANLDSAQTR RAYQGDLRAF
MAFTGIVQPE EFRAVTRAHI LAWRAELEKQ NLAGASIRRK LAALASLYDY LCESNAVTHN
PVRGVKRPKA ETSEGKTPAL GDAQARALLG APPSDTLKGK RDRAILSVLL YHALRREELT
KLLVKDFAQE RRGVPHLRVQ GKGGKLRYLP AHPHSLRLVA EYLAASGHGQ EADSPLFRRT
RAPRAGALAS ALTPGSVYAD VVVRYMAQVG IAGENMGPHA LRATAATNAL EHQADIAKVQ
EWLGHASIST TRVYDRRGSR PEDSPTFKVA Y
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