| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4757 |
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| Symbol | |
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| ID | 4685961 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008760 |
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| Strand | - |
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| Start bp | 138953 |
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| End bp | 141700 |
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| Gene Length | 2748 bp |
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| Protein Length | 915 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639826746 |
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| Product | 2-oxoacid dehydrogenase subunit E1 |
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| Protein accession | YP_973908 |
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| Protein GI | 121583477 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2609] Pyruvate dehydrogenase complex, dehydrogenase (E1) component |
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| TIGRFAM ID | [TIGR00759] pyruvate dehydrogenase E1 component, homodimeric type
[TIGR03186] alpha-ketoglutarate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 73 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATCTAT TCAAGCTGCA AATTCTGCCA TTTTCTTTCT ACAGTAGTAC ACCTATTGAC
ACCCTTGGAA TGAATCCTCC CATGCATCAG CAACTTGCCC CTTTTCGCTC CGTTGAGCCC
GTCGATCCTG ATCCGGCAGA AAGCGCCGAA TGGCGAGATG CACTCATGTC CTTGCTGCAG
GCGTCCGGAC CCGGGCGCAC GCGGCAAATT CTTGACATGC TCGATGCGAT GAGCCGCGAC
CCGAAGATCG CCTGGCAGCC GGCACGCGGC ACGCCTTATG TCAACACCAT TGCGGTCGAT
CAGCAGCCCG TGTTTCCCGG TGACTTGGCC ATGGAGGAGC GCCTGGCTTC GCTCGTGCGC
TGGAATGCGC TGGCCATGGT GGTGCGGGCC AACCAGGCCT ATGGCGAGCT CGGCGGCCAC
ATTGCCAGCT ACGCCAGTGC GGCCGACCTG TTCGAGACGG GCTACAACCA TTTTTTTCAT
GCCCGCTGCG AGGCGCCGGG GCGTGAGCAC CTGGGCGACC TGGTGTTCTT CCAGCCGCAC
AGCTCGCCGG GCGTGTATGC ACGGGCCTAT CTGGAAGGCC GACTGGACGT CGAGGATTTG
AGCTACTACC GGCAGGAATT GTCAGCTCCG GCGGCCACCA CCGGGCAGGG ACCACGCGGC
CTGTGCAGCT ATCCGCATCC CTACCTGATG CCCGATTTCT GGCAGTTTCC CACCGGCTCG
ATGGGCATCG GCCCGATCAG CTCGATCTAC CATGCGCGCT TCATGCGCTA CCTCACGCAC
CGCCAGCTGC TCGATTGCTC GGCCAGAAAG GTGTGGGGCG TGTTTGGCGA CGGCGAGATG
GATGAACCCG AATCGATGAG CGCCTTGACG CTGGCCGCGC GTGAAAAGCT GGATAACCTG
GTCTGGGTGG TCAACTGCAA CTTGCAGCGG CTCGACGGCC CGGTGCGCGG CAATGGCCGC
ATCATCGACG AACTCGAGCA GCTCTTTGCC GGTGCGGGCT GGAACGTCAT CAAGCTGGTG
TGGGGCAGCG ACTGGGACGG TCTGTTTGCA CGCGATGTGA GCGGCGCGCT CGCCAAGGTT
TTTGCCAACA CGGTGGACGG CCAGATGCAG ACGTTTGCCG CCAAGGATGG GCGCTACAAC
CGCGAAACAT TCTTTGGCCA GAACGAGGCC CTGGCCGCGC TGGCCCAAGG CATGACGGAC
GAGCAGATCG ACCGCCTCAA GCGTGGCGGC CACGACATGG TGAAGATTTA CGCCGCCTAC
GCCGCTGCTG CGCAGCACAA GGGCCAGCCC ACGGTGATCC TGGCGCACAC CAAGAAAGGC
TACGGCATGG GCAGCGCGGG CCAAGGCAAG ATGACCACGC ACAGCCACAA GAAGTTTGAC
GAGACCGACC TGATTGCGTT TCGCAATCGC TTCCAGCTGC CCTTGACGGA CGATCAGGTC
ACCTCGCTGA GTTTTTACCA GCCGCCAGCC GACAGCCTGG AGATGCAATA CCTGCATGCG
CAGCGCCAGA AACTGGGCGG CTACCTGCCC AAGCGCTACA CCACCTGCGA GCAGGTCGCT
GTACCCGAGA TTGCCAGCTA CGCCCAGTTC GCCCTCAAGG CCGACGGCAA GGAGATGAGC
ACCACCATGG CCTTTGTGCG CATGCTGGGC AACCTGCTCA AGGACAAGGC CCTGGGCCAA
CGGATCGTAC CGATCGTGGC CGACGAGGCC CGAACCTTTG GCATGGCCAA CCTGTTCAAG
CAGGTCGGCA TCTACTCCAG CGTCGGCCAG CGCTACGCGC CCGAGGACAT CGGCTCGGTG
CTGAGCTACC GCGAGGCCAT GGACGGCCAG ATTCTGGAAG AGGGCATTTC CGAGGCGGGC
GCGCTGGCCA GCTGGACGGC AGCAAGCACC AGCTACAGCG TGCATGGCCT GGCCATGCTG
CCGTTCTACA TCTATTACTC CATGTTTGGC TTTCAGCGCG TGGGCGACCA GATCTGGGCA
GCGGCCGACC AGCGCGCGCG CGGCTTTTTG CTCGGTGCCA CCTCGGGCCG GACCACGCTG
GGCGGCGAAG GGCTGCAGCA CCAGGACGGC ACCAGCCACC TGGTGGCCGC CACCATTCCC
AACTGCAAGG CCTACGACCC GGCGTTTGCC GGTGAGCTGG CCGTCATCAT CGACCACGGC
ATGCGAGAGA TGATGGTGGA GCAAAGGGAC ATTTTCTACT ACATCACCAT GATGAACGAG
AACTACGCCC AGCCCACCCT ACCCGCCGGG GTGGAGCACG ATGTAATTCA AGGGTGCTAT
AAATTCAATA GCTATTTGCC AATGAACAAC GAGGGCCATG CCGCTGAAAT ATCCAGAGAA
GTGACCTTGA TGGGGTCGGG GGCCATTCTT CTTGAGGTGA TCAAGGCCGC GCAGCAACTG
GCCCTGCAGG GCATCTCGGT GACCGTGTTC AGCGTGACGA GCTGGAGCGA ACTCGCACGC
GAAGGCCAAG CCAGCACCCA GCACACGCCA GCGGGGAAAA GGAGCGAATC GGTGCCTTTC
ATTGCCAACA TGCTGCGCGC AAGCAGCGGC CCCATCATTG CCGCGACCGA CTATGTCCGT
GCCGTGCCGG AAAGCGTGCG TGCCTTCGTG CCCGATGGGC GCGACTACCT CACCCTGGGC
ACTGACGGTT TTGGTCGGAG TGACACGCGT GCGGCACTGC GTGCCTTCTT TGGCGTCGAT
GCATCCAGCA TTGCGCAGGC CGCCCTCACG CTGCTGGCCC AGGACTGA
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| Protein sequence | MYLFKLQILP FSFYSSTPID TLGMNPPMHQ QLAPFRSVEP VDPDPAESAE WRDALMSLLQ
ASGPGRTRQI LDMLDAMSRD PKIAWQPARG TPYVNTIAVD QQPVFPGDLA MEERLASLVR
WNALAMVVRA NQAYGELGGH IASYASAADL FETGYNHFFH ARCEAPGREH LGDLVFFQPH
SSPGVYARAY LEGRLDVEDL SYYRQELSAP AATTGQGPRG LCSYPHPYLM PDFWQFPTGS
MGIGPISSIY HARFMRYLTH RQLLDCSARK VWGVFGDGEM DEPESMSALT LAAREKLDNL
VWVVNCNLQR LDGPVRGNGR IIDELEQLFA GAGWNVIKLV WGSDWDGLFA RDVSGALAKV
FANTVDGQMQ TFAAKDGRYN RETFFGQNEA LAALAQGMTD EQIDRLKRGG HDMVKIYAAY
AAAAQHKGQP TVILAHTKKG YGMGSAGQGK MTTHSHKKFD ETDLIAFRNR FQLPLTDDQV
TSLSFYQPPA DSLEMQYLHA QRQKLGGYLP KRYTTCEQVA VPEIASYAQF ALKADGKEMS
TTMAFVRMLG NLLKDKALGQ RIVPIVADEA RTFGMANLFK QVGIYSSVGQ RYAPEDIGSV
LSYREAMDGQ ILEEGISEAG ALASWTAAST SYSVHGLAML PFYIYYSMFG FQRVGDQIWA
AADQRARGFL LGATSGRTTL GGEGLQHQDG TSHLVAATIP NCKAYDPAFA GELAVIIDHG
MREMMVEQRD IFYYITMMNE NYAQPTLPAG VEHDVIQGCY KFNSYLPMNN EGHAAEISRE
VTLMGSGAIL LEVIKAAQQL ALQGISVTVF SVTSWSELAR EGQASTQHTP AGKRSESVPF
IANMLRASSG PIIAATDYVR AVPESVRAFV PDGRDYLTLG TDGFGRSDTR AALRAFFGVD
ASSIAQAALT LLAQD
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