Gene Pnap_4654 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4654 
Symbol 
ID4685851 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008760 
Strand
Start bp41568 
End bp42146 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content45% 
IMG OID639826650 
Productstress protein 
Protein accessionYP_973813 
Protein GI121583382 
COG category[T] Signal transduction mechanisms 
COG ID[COG2310] Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0674127 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones72 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATTA GTTTGCAAAA AGGCGGTAAC GTCAACCTTT CGAAAACAGA CCCCAATCTC 
AAGCAAGTGC TGCTTGGCCT TGGATGGGAT GCACGTTCTA CAGATGGCGT GGATTTCGAT
CTAGATGCTA GTATTTTCAT GGTCACTGAG AATGGCCGAG TCCGTTCTGA TAGCGATTTC
ATTTTTTATG GTCAGTTACG CTCACCCTGT GGTTCCATTG AGCACACCGG AGATAACCGC
ACTGGTGCTG GAGAAGGCGA TGACGAGGGA CTTAAGATAA AACTTGACCA AATTCCCTCC
GTTATTACCC GGCTGGTGGT AGCCGTTACT ATTCATGATG CACAAGTACG TAAACAGAAT
TTCGGCATGG TGCATGACGC ATTCATACGT CTAGTGAATA TTGAAACCAA TATCGAAATT
ACTCGATTTG ATCTGTCGGA AGATTACTCA ACTGAAACAG CCATGATTTT TGGCGAAATT
TACCGTTATG GCAGCGAATG GAAATTTAAA GCTGTCGGGC AAGGTTATGC GGGTGGTCTG
AAAGCGCTTG CTATTCAGCA TGGCGTTAAT GTAAGTTAA
 
Protein sequence
MAISLQKGGN VNLSKTDPNL KQVLLGLGWD ARSTDGVDFD LDASIFMVTE NGRVRSDSDF 
IFYGQLRSPC GSIEHTGDNR TGAGEGDDEG LKIKLDQIPS VITRLVVAVT IHDAQVRKQN
FGMVHDAFIR LVNIETNIEI TRFDLSEDYS TETAMIFGEI YRYGSEWKFK AVGQGYAGGL
KALAIQHGVN VS