| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4589 |
|---|
| Symbol | |
|---|
| ID | 4685508 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008758 |
|---|
| Strand | - |
|---|
| Start bp | 162441 |
|---|
| End bp | 163967 |
|---|
| Gene Length | 1527 bp |
|---|
| Protein Length | 508 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 639826435 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_973599 |
|---|
| Protein GI | 121583158 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 52 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGCCAG CAATCAAAGA TGTCGATTTC GCGGTCGATG AGCATATTTG GGGCCACAGG
CTTTATGACG AGCAGCTTCC TCATATGGCG GTCCTCGAAT TCTTAGGAAT TCTGGCGTCG
AACAGGATCA GCCCATTGCG ACCGCCTTCT GCAGGAGAGG TGACGTATCG TCCTCAGCGG
CAAATTAGGT TGCGCTCGTT GCTCTTCAAC AATCCTTATA TCGAGACGAT TCGCGCGAGG
GAAGTGTCGG ATGAGGACAA GTGGAGGCAG TGGACTGAGC GATTTACTGA GGATTGCGCG
AAGCTCGAAA ACGGCGACAT GAGTTATTTG CGAAACGTAT TCAATACGTT CGACGATTTT
GCCAAGGCGG TGGAGCTGTT GAGGTCATCA TCTTTCGAGG CTCGAAGCAA CAAACGCTGG
AGCTCCAAGT TCGTCTTCCC ATTTGGTCCA GATGCGCTTT ATGAGGACTT GCGCATCGGC
GCCGATGGCG CTGCTTCCAA TGACCGCCGC TTTTTCGCCC GCACTGGTGA ATTGCTTTAT
CTCATGCTCA CTCGTGCGGA AAACGGCGCC AAGCTTGGTG ACCTGTTAGT CGAGCGCTTG
TTCGACCGCA AAGCGCCCAT GAATAGGCTC GTCCGAGCGC TTCAAGGGGA AACTCAAACG
TCAGGATCGG ACAAGACTGT AGGTTACCTG CCCCATGCCA CGCACCCAAG ATTTGACAGA
CTGTGCGACG ACTGGCTAGC TATCCTTTCG CGCGACATGC CGGTTTACGA CGCCTTAGAG
CATCTCATGG CGAGCGCGGG TTTAAATCTG CTTCTCTATT TCCTGGAGTG CGGCAAGGCC
CAGGCAGGTG ATGTCGACCC GGTTGAGCTC ATTTGTGAAA TTGTCTCCCG CGAACGCACC
AAGGTGAGAG CGCTTTCAGG AGAGTCCTAC CAGTTCAACC AAGGCCTGTC CCTTCGAGCG
ATCAGGGCAT CTGTTGAAAG CGTCAGGCTT ACCGACGAGT GGACCAAGGC TAGTGAGTCG
GATGAGCCGA ATGCGCAGAG CGCTGCGCTC ATGAGGTCCT GGTTTCAATG GCCTCCTGAG
AATGGATCGG ATGGTTCGGT CACTGGCGAC ACGACGGGTG ACATGCTGAT CAAAAGTCTT
GTTGATATGG CTGAATCGCG TCATGAACAG CATTTCGGAA AGATCCATGC GGCTTGGTCA
AGAGCGGTGG GCTTGAGTTC GAGGCGCCTT TCGCGGCGCA CCCGCTATGC CCCTAATGAC
AAGCTTTTAA AAACGTTGGT CATTTCTATG GTGGACGACC GGATGCAGTT CGACGAGTTC
CTCAGCGAAA TTCGCAATCG TTACGGCATG ATCATTGGCG ACGCTGAGGG CGGGCGGCTG
ATGAAGGAAA AGTTGGTAGA CCAAGAGGCG CTCAGCGACA ACCGCGAGAA TTTGGAGGCG
CGCCTTGTTG GCCTCGGGCT CGTGAGGCGC TTATCCGACT CCTGCTCTTT CGTTGAGAAC
CCTTTTACCT TTGAGGTCGC TCAATGA
|
|---|
| Protein sequence | MRPAIKDVDF AVDEHIWGHR LYDEQLPHMA VLEFLGILAS NRISPLRPPS AGEVTYRPQR
QIRLRSLLFN NPYIETIRAR EVSDEDKWRQ WTERFTEDCA KLENGDMSYL RNVFNTFDDF
AKAVELLRSS SFEARSNKRW SSKFVFPFGP DALYEDLRIG ADGAASNDRR FFARTGELLY
LMLTRAENGA KLGDLLVERL FDRKAPMNRL VRALQGETQT SGSDKTVGYL PHATHPRFDR
LCDDWLAILS RDMPVYDALE HLMASAGLNL LLYFLECGKA QAGDVDPVEL ICEIVSRERT
KVRALSGESY QFNQGLSLRA IRASVESVRL TDEWTKASES DEPNAQSAAL MRSWFQWPPE
NGSDGSVTGD TTGDMLIKSL VDMAESRHEQ HFGKIHAAWS RAVGLSSRRL SRRTRYAPND
KLLKTLVISM VDDRMQFDEF LSEIRNRYGM IIGDAEGGRL MKEKLVDQEA LSDNRENLEA
RLVGLGLVRR LSDSCSFVEN PFTFEVAQ
|
|---|
| |