Gene Pnap_4546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4546 
Symbol 
ID4685548 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008758 
Strand
Start bp111554 
End bp112051 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content55% 
IMG OID639826395 
Producthypothetical protein 
Protein accessionYP_973560 
Protein GI121583119 
COG category[S] Function unknown 
COG ID[COG3762] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.059315 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATCA AACGAATCAT GAAGCATTTG CTGACGACCC GCGGACAGGT CAAACGGGCC 
TTTCCGCACA GCACATTGAC CAGAATCGAA GCAGCGATCA AGGCAAGCGA GATAACCCAT
GTCGGAGAAA TCCGTTTCGC GGTCGAAGGC GCACTCGATG GCATGCCGCT GTTCAAAGGC
CAGTCGGCCA GAGAACGTGC GATCGATTTA TTTGCGCTAC TGCGGGTGTG GGACACCCGG
CACAACAATG GTTTGCTGAT TTATCTGTTG CTGGCTGACC GCGCAGTAGA GATTGTTGCC
GACCGAGGGA TTCATGAAAA AGTGGGTTCG CAGGATTGGA ACAAGATTTG CCAACAGATG
GAAAGGGCCT TCAGTCAATC GAACTATGAA AGCGGTGTGC TCAGCGGCGT GCAGGCTGTG
ACGCAGCACC TGGTGCAGCA CTTCCCGGCT GGCGGCCAAA ACGGCAACGA ACTACCCGAC
AAGCCGGTGG TCCTGTGA
 
Protein sequence
MNIKRIMKHL LTTRGQVKRA FPHSTLTRIE AAIKASEITH VGEIRFAVEG ALDGMPLFKG 
QSARERAIDL FALLRVWDTR HNNGLLIYLL LADRAVEIVA DRGIHEKVGS QDWNKICQQM
ERAFSQSNYE SGVLSGVQAV TQHLVQHFPA GGQNGNELPD KPVVL