| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4512 |
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| Symbol | |
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| ID | 4685579 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008758 |
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| Strand | + |
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| Start bp | 81682 |
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| End bp | 83340 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639826362 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_973527 |
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| Protein GI | 121583086 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.201635 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 66 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAAA AATATCTCCT TTTCGCGCTG CTGGCTGCTG GTGTACTGGG CGCTACGGGG
TACGTCTTGT ATGCCCTGGG TGCCAAACAG GCTGGAACCA TGCCAGCGGC CCCTATGAAT
ATGCCTGCCG ATGCTGGCGC CAGCCCAACC GCAGGCCCTC AAAGCATGGC AGAAGGAGAA
GAGGCGACGC GCCGGCACAT CAGCGCAGGA CTCAAGGCCG GCGACACCGA TCCAGTGACC
GGCAGCAAGA TCTTGTACTA CCGTGACCCC ATGGTGCCGG CCAGCAAGTT TGACAAGCCG
GCCAAGTCCC CTTTTATGGA CATGATGCTG GTGCCGGTCT ACGCTGCAGG ACAAGCCGAT
CAGGGCAAGC TCATCGTGAG CCCGCGCATC CAGCAAAACC TGGGCGTGCG CACCGCAGTG
GTCACCGATG GCACATTGTC GCCACAGGTG TCTGCCGTCG GCAGCATCGC TTTTAACGAA
CGTGACCAGG CGACGGTTCA GGCCCGTGCC ACTGGTTATG TCGAGCGATT GCATGTGCGC
GCCACGCTCG ACCGGGTCAG GAAGGGACAG CCGCTGCTCG ATCTTTATGT GCCCGAGTGG
GTGGCAGCGC AGGAAGAGTT TTTGGCTGTT AAACGCATGC AGGGCAGCGA CCTTGCATCG
CTGGTCGATG GCGCCCGGCA ACGCATGCGC CTGGCGGGGA TGAGCGACGA ACAAATCCGT
CAGGTTGAGG CCAGCGGCAA GTCGCAGGCG CGCTTCACCA TCACGGCGCC GCTGGGCGGC
GTGGTCGTCG AGCTTATGGC CCGCGAAGGC ATGACGGTGA TGGCCGGAAC GACCCTTTTT
CGCATCAATG GGCTGTCCAC TGTTTGGGCG AATGCCGAGG TGCCCGAAAG CCAGGCCGCC
TTGGTGCGGC CAGGCGCCAA GGTGCAGGCG AGCAGCCCGG CGGCCCCAGG TATGACCTTC
GACGGCAAAG TTCAGGCCAT CCTGCCGGAG GTCAATTCGG CAACCCGCAC GCTCAAGGCC
CGGCTGGAGC TGGACAACCC CGGCGCGCGC CTGGTGCCGG GCATGTTTGT GTCAATGCAT
TTCATGGGCA TGCAGGCACA AAAGTCGCTC TTGGTGCCGA CCGAAGCGGT GATTCAGACC
GGCAAGCGCA CGGTTGTCAT ACTGGCAGAA GAAAATGGAT GGTTCAGCCC GGTCGATGTG
CAACCTGGCA TTGAAAGTGG CGGCCAGACC GAAATCAAGC GCGGGCTGCA GGCCGGTCAG
CGCGTGGTGG TGTCTTCGCA GTTCCTGATC GATTCGGAAG CCAGCCTCAA AGGCGTGGAA
GCCAGGCTCA ACGAGAACCC CAAGCCGGCT GACGCTACTG CTACTACTGC CACTGCCGCA
CCGCGGCATG AAGGCCAGGC CAAGGTCATG GCCATTGGCA AAGAGGCCAT CACGCTGTCG
CACGGTCCGA TTGCCACGCT CAAGTGGGGC GCGATGACCA TGGATTTCAA GCGGCCTGCA
CCCCCAGACC TGCCCAAAAA TCTTGCGGTT GGCAGCCAGG TCGGCTTTGA ATTTTTCATG
GATGCCGAAG GCTTGCCGCA GCTGACACGG GTCACGCCCA TGGCACTGGC AGCACCAGCA
CCAGGCGCTG CCCCAATGGC TGCAGGGGAG CAGAAGTGA
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| Protein sequence | MNKKYLLFAL LAAGVLGATG YVLYALGAKQ AGTMPAAPMN MPADAGASPT AGPQSMAEGE
EATRRHISAG LKAGDTDPVT GSKILYYRDP MVPASKFDKP AKSPFMDMML VPVYAAGQAD
QGKLIVSPRI QQNLGVRTAV VTDGTLSPQV SAVGSIAFNE RDQATVQARA TGYVERLHVR
ATLDRVRKGQ PLLDLYVPEW VAAQEEFLAV KRMQGSDLAS LVDGARQRMR LAGMSDEQIR
QVEASGKSQA RFTITAPLGG VVVELMAREG MTVMAGTTLF RINGLSTVWA NAEVPESQAA
LVRPGAKVQA SSPAAPGMTF DGKVQAILPE VNSATRTLKA RLELDNPGAR LVPGMFVSMH
FMGMQAQKSL LVPTEAVIQT GKRTVVILAE ENGWFSPVDV QPGIESGGQT EIKRGLQAGQ
RVVVSSQFLI DSEASLKGVE ARLNENPKPA DATATTATAA PRHEGQAKVM AIGKEAITLS
HGPIATLKWG AMTMDFKRPA PPDLPKNLAV GSQVGFEFFM DAEGLPQLTR VTPMALAAPA
PGAAPMAAGE QK
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