Gene Pnap_4430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4430 
Symbol 
ID4685296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008757 
Strand
Start bp339167 
End bp340312 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content69% 
IMG OID639826284 
Producthypothetical protein 
Protein accessionYP_973449 
Protein GI121583007 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.382234 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCCAA CGGGAACCCA AAAGAGCGAT GGCGCGGGCC TGGAGCGGCT GTGGCTGCAG 
GTGTGCGCCT CGCGCGGCAC GCCCGCGCCC GATCCGGGCC AACGTGGGCA GTTCTTGCAC
GACCTCGAAC CCGAGGCGCG CAGCACGCTC GAAAGCGTCC TGACGCTGGC CGCGCGGGGC
CGGGAAAAGC CGGGCGACCT GGGGCTTTTG AGCTGGGCCG CGGCCTGCAC GCGCCCTGCC
CTGCTCAAGC AACTGCAAAG CCACGGCCTG GCCTTCACCG GCGCCGAGCT GTTTGCCTGC
GGCCTGAAGC TGCGGCAGGA CGGCTGGGAC ATGCAGCAGC GCATCGCGCA GTTGCACAAT
CACCCTGAGG ATGTGGACAC GCTGCGCGCC TGGCTGCCCG CCGTGCCCCA GGAGGAGCCT
GTGGAGCTTG TGGATCTGCC CCTGCAGGCG CTGGCCGCGC CTGCAGGCCA GCAAGAAACA
GCGCCCGAGG CGTTTTACTT CTGGCCCGAT GACGGCCCGC TCGATGACGA CGCGCCCGGC
TGGGATAGGG AGCACATGAA TGCAATGGAC ACAATGCCGG CAGCGCCCGC CTCAGGCAGA
ACCCAGGCAC TGCCCCTGCT GCCCACCCGC TTCGAGCGCC AGGCGTCCCC TGCATCGAGC
GCGGCCCCGG CCGAGCGGGA CAAGAGCCGA CTGCAGCTTC GCCTGTTCGG CAAGGCGGCC
GCCCACACGC TGGAGGTCAC CGCGCACCGC CGGGGCGGCG ATTTTATGGG CGTGCACGTG
GTCAGCATCG ATTCGGCCCA TGCGCTGAGC GCCGGCGGGG GCTACGCTTG GGAGCGCAAG
CTCGTGCTGC AGCTCACGCC CGAGGAAATG CCGGCGGTCG TCGCCACGCT GATCGGCATC
ACGCCCTCGG TCCGCTTTGG CCACCACGGC GCGACCCAAG CCAAGTTCAT CGAGCTGCGC
CGCCAGGAGG GCGGACTGGT GCTCGTCACG GGCGAGCATG CGGCCATCTA TTCGGTGCCC
GTGCCCACCG CTACCCTCTA CTACGTGCTG GACCTGTTCT GCCGCGCCAT GGCCATGGAG
GGTGACAAGC CCGTGCGCAG CGTCTCGGAG ATTCTGGCGC TGGTCAAGGC CGCGCACGGC
TTTTAA
 
Protein sequence
MQPTGTQKSD GAGLERLWLQ VCASRGTPAP DPGQRGQFLH DLEPEARSTL ESVLTLAARG 
REKPGDLGLL SWAAACTRPA LLKQLQSHGL AFTGAELFAC GLKLRQDGWD MQQRIAQLHN
HPEDVDTLRA WLPAVPQEEP VELVDLPLQA LAAPAGQQET APEAFYFWPD DGPLDDDAPG
WDREHMNAMD TMPAAPASGR TQALPLLPTR FERQASPASS AAPAERDKSR LQLRLFGKAA
AHTLEVTAHR RGGDFMGVHV VSIDSAHALS AGGGYAWERK LVLQLTPEEM PAVVATLIGI
TPSVRFGHHG ATQAKFIELR RQEGGLVLVT GEHAAIYSVP VPTATLYYVL DLFCRAMAME
GDKPVRSVSE ILALVKAAHG F