| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4405 |
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| Symbol | |
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| ID | 4685454 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008757 |
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| Strand | - |
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| Start bp | 323214 |
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| End bp | 324647 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639826260 |
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| Product | HNH endonuclease |
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| Protein accession | YP_973425 |
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| Protein GI | 121582983 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1403] Restriction endonuclease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0177666 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.269111 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGTTT TTGTATTGGA TCGGGGCGGG CAGCCGGTGA TGCCCTGCAG CGAAAAGCGC
GCCCGGCTGC TTCTGCAGAG CAAGCGCGCC AGGGTTCACC GGGTCATGCC GTTCACGATT
CGACTGATCG ACCGAAGCCA GACGGACTGC CTGCTCCAGC CGCTGCGCCT CAAGCTCGAC
CCGGGCAGCC GGGTCACGGG CCTGGCAGTG GTGCGGGAGA AGCCCAACAC GCCAGGCGCT
AAAAATGCAC CTGCCTTTGA AATCGCCGTG ATCAACCTGT TTGAGCTGGT GCACCGGGGC
CGGCAGATCA GCGAAGCCTT GACCGCGCGC CGGCAGATGC GCCGCCGGCG CAGAGGCAAC
TTGCGCTACC GCGCACCCAG GGGCCTCAAC CGGGGCAACA AGCAAAAAGG CTGGCTCGCC
CCGAGCCTGC AGCACCGCGT CGACACGACG CTGGCCTGGG TGGCGCGCTT GCGGCGCCTG
GCGCCCATCA CGGCGCTGAG CTCCGAACTC GTGCGCTTTG ACATGCAGCA GCTAGCAAAC
CCGCAGATCG AGGGCGCCGA GTACCAGCAG GGCACCCTGG CGGGCTACGA GGTGCGCGAG
TATTTGCTGG AGAAGTGGAG CCGGACCTGC GCCTACTGCG ACGCACAAAA CACGCCGCTG
CAAATAGAGC ACATCGAGCC CCGAGCCCGG GGCGGCAGCC ACCGGATATC CAACCTGTGC
CTGGCCTGCG GGCCGTGCAA CCAGAAGAAA GCCGCCCGCA CGCTGCAGGA CTTTTTGAAG
AAAGACCCGG CGCGCCTGGC GCGCATCCTG GCGCAAGCCA AAAAACCCCT GCGCGATGCC
GCTGCGGTCA ACGCGACCCG CTGGGCGCTG GCCGAGGCGC TCAAGGCGAC AAGCCTGCCG
CTGGAGCTGG CCTCGGGCGG CCAGACCAAA TTCAACCGCT GCACGCTGGG CATGCCGAAG
ACCCATGCGC TGGACGCGGC CTGCGTCGGC CGGGTCGATG CCATAGCCGG ATGGCAAAAC
CACGCCTCAG CTACCCTGAC GATCAAGGCC ATGGGCCGGG GAAGCTACCA GCGCACGCGC
CTGGACGGCT TTGGCTTTCC CCGCGGTTAC CTGATGCGCG AGAAGTCGGT CCACGGCTTT
CAGACGGGCG ACCTGGTCAA GGCGGTAGTG CCCAAGGGCA AGAAAGCGGG CACGCATGTG
GGGCGTGTTG CGATCCGCAA GACGGGCAGC TTCAATATCA CCACCGCACG CGGCGTGGTG
CAAGGTATTG GCCACAAAAA TTGCCGCGTC GTTCAGCGAA ACGACGGGTA TGGCTATTTT
TTCAACCGGG CCCAACACAC AGGATGTGAG CAGGCAGGGC CCGGGGCAAC GGATGCGTTG
CATCCGGCGC TCTACCTCCC CGGGCTGAAC CCCGGGGTTT CACGCGCATC TTGA
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| Protein sequence | MAVFVLDRGG QPVMPCSEKR ARLLLQSKRA RVHRVMPFTI RLIDRSQTDC LLQPLRLKLD
PGSRVTGLAV VREKPNTPGA KNAPAFEIAV INLFELVHRG RQISEALTAR RQMRRRRRGN
LRYRAPRGLN RGNKQKGWLA PSLQHRVDTT LAWVARLRRL APITALSSEL VRFDMQQLAN
PQIEGAEYQQ GTLAGYEVRE YLLEKWSRTC AYCDAQNTPL QIEHIEPRAR GGSHRISNLC
LACGPCNQKK AARTLQDFLK KDPARLARIL AQAKKPLRDA AAVNATRWAL AEALKATSLP
LELASGGQTK FNRCTLGMPK THALDAACVG RVDAIAGWQN HASATLTIKA MGRGSYQRTR
LDGFGFPRGY LMREKSVHGF QTGDLVKAVV PKGKKAGTHV GRVAIRKTGS FNITTARGVV
QGIGHKNCRV VQRNDGYGYF FNRAQHTGCE QAGPGATDAL HPALYLPGLN PGVSRAS
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