Gene Pnap_4401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4401 
Symbol 
ID4685468 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008757 
Strand
Start bp320087 
End bp321268 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content55% 
IMG OID639826256 
Producthypothetical protein 
Protein accessionYP_973421 
Protein GI121582979 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.366288 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCTGC TCGACGATCC GATATTTCAT CGAAAAGAAC TCACAGAGTA TTACCTGGAG 
TATTTGAAAT CACCCGAGTC ATCGTCAGGT GTGTTCTTGG CAGCTCCCCG ACGAACCGGC
AAAACCACCT TCATCAAGGA AGACCTGGTA CCGCGCATAC GTTTGGAAGG CGCTACCGTC
ATCTATGCCG ACCTCTGGGA AGACAGGTCT ATCAATCCAT CGATCGTGAT CATCAATGCC
ATCCGTGAGT CGATCCTGGC ATGCGATGGG GCTGTCCTGA AAGCTGCCAA GTCCGCAGGA
CTCAGCCGGT TCAAACTTGC TGGCTTTGAA ATGGATCTGG CCAAGATCGG CTCGAAGGAA
GGCGAGAGCA TCTCCACTAC ATTGCAAAGG CTCAGTGCAG CAACGCAAAA GCCGATCATC
ATGGTGATTG ACGAGGCCCA GCATGCACAG ACCACGGAGG AGGGTCGCCA AACGCTCTTT
GCCCTCAAAG CAGCTCGCGA TGCGCTCAGG GGCGCAGGGC CGGGTTTTCG CTTGATTGCC
ACGGGCTCGA ACAGTGACAG GCTGGCCGTA CTGGTCAGCG CCAAGGATCA GGCGTTTTTC
ATGGCGCCCA TGGAGGAACT CGATCAACTG GGTGATGATT ATTTGCAATG GTTGCTCGAC
AACTCGCAGA AAGCAGCCAA GCCATCGCTG GCTGCTCTCA AACGTGTTTT TGAGATGTGC
AGCCGGCGAC CGGAACCGTT GAAGAAAGTG ATGCGCGATC TTTACAAAAA AGGCGGTATG
GACGTAGCCG AGCTCGACGC TCGCCTAGAA CTTCTCATGA TTGATGCCCT GCAGGGTCTG
CGAAACAATT TCATTCAGGG TTTGCATGGA CTTGAGCCTT TGGATGCAGC AGTCATGCGG
CGCATGGCAC AAACCGGAAA AGCCTTCACC CCTTTTGATA CCAAGGCATT AGAGCATTAC
AAGCGCCTTC TTCAAGATTA CGGCCCGGCT GAACAGCCTG CACCTTCCCA GTCTGCGGTT
CAGGCCGCGT TGGAGCGACT GCGCAAGGAC GGCTTGGTGT GGAACGCTGG CCGTGGGCTC
TGGTTCATCG AAGACACCCA GCACGTTGCC TGGATTCAAA GCGCCATGGC AGAGGAGGAT
GCGTTGAGGC AGGCCGCAGC TGGTGGGAAC GCATCGCAGT GA
 
Protein sequence
MQLLDDPIFH RKELTEYYLE YLKSPESSSG VFLAAPRRTG KTTFIKEDLV PRIRLEGATV 
IYADLWEDRS INPSIVIINA IRESILACDG AVLKAAKSAG LSRFKLAGFE MDLAKIGSKE
GESISTTLQR LSAATQKPII MVIDEAQHAQ TTEEGRQTLF ALKAARDALR GAGPGFRLIA
TGSNSDRLAV LVSAKDQAFF MAPMEELDQL GDDYLQWLLD NSQKAAKPSL AALKRVFEMC
SRRPEPLKKV MRDLYKKGGM DVAELDARLE LLMIDALQGL RNNFIQGLHG LEPLDAAVMR
RMAQTGKAFT PFDTKALEHY KRLLQDYGPA EQPAPSQSAV QAALERLRKD GLVWNAGRGL
WFIEDTQHVA WIQSAMAEED ALRQAAAGGN ASQ