Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_4374 |
Symbol | |
ID | 4685389 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008757 |
Strand | + |
Start bp | 280963 |
End bp | 281829 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 639826229 |
Product | deoxyribonuclease I |
Protein accession | YP_973394 |
Protein GI | 121582952 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2356] Endonuclease I |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000699204 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTGT TTAAGTACAT ATACTCAATA AACATACTCA AACGCAAAAC CGCTCCCACC ACCATGAATT CTCAGGTTTT TCGACGCCTG CTCGGCATAG TTTTCACACT GCTATTCCTG GTCAGTTGTC GCCCTTCTGC ATTGCAGCCA CCACCAACGA ATCAAACAAA GCAAGTTGAG AAGGCAGAAG TTGAGAAGCC AGAACTAGTC AACAGCAAAA AAGAGATCGG ACACCGCGAC TTTGCCAACG CAAAAAAAAT ACTCCCTGAA GTTTTCGCAG GTTTGGAAGA AGATTTCTAT TGTGGTTGTA CCTATTCAGG CAAGAAGGTT GACCTGAATA GTTGCGGCTA TGTGCCGCGA AAGAACCAGA CGCGCGCAGA GCGCATCGAG TGGGAGCATG TGGTTCCAGC CTGGGTTTTG GGACATCAGC GTCAGTGCTG GCAACAAGGC GGACGAGATA ATTGCACAGC TTCAGATACA GAATTTAGTA AGGCAGAAGG CGATTTGAAC AATCTGGTGC CAGCCGTTGG CGAGGTCAAT GGCGATCGTA GCAATTATTC CTATGGAGCC TGGAGCAACA ACCCGACGCC CATTTATGGA AGTTGTAAAA CCGTCATCGA CTTTAAATTA AAGAGGGCTC AGCCACGCGA AGAAGTGCGC GGCAGGGCAG CGCGGATCAC CCTCTACATG CACGAAAAAT ACAAATTAAA CATGAGCCGG CAAGATCGCC AGTTGATGTG TGCATGGGCC AAACTTTATC CAGTAGATAC CTGGGAACAA ACCCGCGATA AAAAAATTAT TCGCTGGCAA GGGGAGGGCA ACCCTTTGGT ATCTGACCCG CAGCAGCTTT CTAGCCTTTG CCCTTAG
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Protein sequence | MKLFKYIYSI NILKRKTAPT TMNSQVFRRL LGIVFTLLFL VSCRPSALQP PPTNQTKQVE KAEVEKPELV NSKKEIGHRD FANAKKILPE VFAGLEEDFY CGCTYSGKKV DLNSCGYVPR KNQTRAERIE WEHVVPAWVL GHQRQCWQQG GRDNCTASDT EFSKAEGDLN NLVPAVGEVN GDRSNYSYGA WSNNPTPIYG SCKTVIDFKL KRAQPREEVR GRAARITLYM HEKYKLNMSR QDRQLMCAWA KLYPVDTWEQ TRDKKIIRWQ GEGNPLVSDP QQLSSLCP
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