Gene Pnap_4350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4350 
Symbol 
ID4685209 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008757 
Strand
Start bp261131 
End bp262006 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content62% 
IMG OID639826209 
ProductAntA/AntB antirepressor domain-containing protein 
Protein accessionYP_973374 
Protein GI121582932 
COG category[K] Transcription 
COG ID[COG3561] Phage anti-repressor protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAACG GAAAAACGCA ACCCGATCCA GTGGCTACGG GCCACGGCAG TGCGCAGGCC 
CTGCCCAAAA ATTCCGGCGC CTCCAAACCC AAACCCGGTG ATGCCGTGCG CAAGGCCACC
AAAAAGGCGA TTGCCAGCCT GGGTGAAACC GCGCACCAGC CGGCCGCGAT GGCCGCGTCG
CCTGTTGGCG GCGACAGCCC GGCCGGCCTG GAGCTGGTGC AGGTGGCACA AGGAGTCATC
GGCGGGCTGG AGTGCCTGGT CGTCGATGGC AGGGCGCTTC ACGAGGTTCT TGGTGCCAAG
CGCGACTTTG CGACCTGGCT CAAAAGCAAG CTGGACGAGT ACGGCTTTAT TGAGAAAGTC
GATTTTGAGA TATTCCCCCA AACGGGGGAA AACTCCAAAG TCGGCAGACC AACACAAGAT
TACAGCTTGT CCCTCGACAT GGCCAAGGAG CTGGCGATGG TCGAGCGCAC GCCGCAAGGG
CGGGCGGCCA GGCGCTACTT CATCGCGTGC GAGCAGCGCC TGATGCAGGC CGGCATCCCG
GCGCCAGCGC TGGCGCAGCC GACCCACGGT CCGGTAGGCC ATGAAGGAGG CGACATGCTC
GACTACTTCG GGCCGGAAGA TGTGCACGAA ACGGCAATGA TCCACAACGC CATGTACACG
CGCACGTGGC TGCTTGCCAT GCGCGAGGCG AACAACGTGC TCCTTCTCGG GCGCGACGCA
GGCATTGCCG AGGGCTTTGC CTGCGTCTAC CAGCAGCGCA TGCTGAGCCA GCTGGTAAAA
AGCCTGGAAA GTATCAATTT CGCTGAGCGG TTCAAGGACA ACTATATCGC GGACACGACG
GCCTATATAA ACAGCTGGAT GCCTGCGCCT AACTGA
 
Protein sequence
MPNGKTQPDP VATGHGSAQA LPKNSGASKP KPGDAVRKAT KKAIASLGET AHQPAAMAAS 
PVGGDSPAGL ELVQVAQGVI GGLECLVVDG RALHEVLGAK RDFATWLKSK LDEYGFIEKV
DFEIFPQTGE NSKVGRPTQD YSLSLDMAKE LAMVERTPQG RAARRYFIAC EQRLMQAGIP
APALAQPTHG PVGHEGGDML DYFGPEDVHE TAMIHNAMYT RTWLLAMREA NNVLLLGRDA
GIAEGFACVY QQRMLSQLVK SLESINFAER FKDNYIADTT AYINSWMPAP N