| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4338 |
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| Symbol | |
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| ID | 4685472 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008757 |
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| Strand | - |
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| Start bp | 250999 |
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| End bp | 252381 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639826197 |
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| Product | HipA domain-containing protein |
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| Protein accession | YP_973362 |
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| Protein GI | 121582920 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3550] Uncharacterized protein related to capsule biosynthesis enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.850917 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAGGC AAGTCCGCGA ACTCTACGTC TTTGCCAGCA TCGCCAAGAA GGCTGGTCCT
CGGTTTGTTC CCGCAGGACT CCTGACGTTG ACCGAAGACC TCGGAGCCGG CGCGCGCAGC
CGCGAGCTGG CTTCACGGTT TTCTTACGGA ACGCGCTACC TCCAGCGGCT TGAAGCCATC
GAGATTGACC CGGTGAGCCT GTCCATCCCG GACCGCAAGG CGGCCATTGG CCAGGAGTTC
TTTCCGGCCA ATGGCCTGGA AGAGTTCGGC GGCATTCGCG ATGCAGCGCC CGATGCCTGG
GGGCGGCGAG TCATCGAGGC GCGTCGCAGA GTTCCCGCCA ACAGCTTGGC CGAGGCCGAT
TACCTACTCC AGGCCGGTGG CGACCGTGTC GGAGCGCTCG ATATTCGAGC CGACAGCACA
AGCCCCGACT CCCCATCGGC AAGCGACATG CGCTCACTGG GGTACGTTCT GCAGGCCGCA
GACAGGGTGG ATCAAGGCTT GCCGGTGCCT GCCAGCCTGG AGGACTATCT GGGCGCCGGA
CCTTCTGCCG GCGGCGCGCG GCCCAAGGCA TCGGTGCGGG ACGATGACGG CGCTTTGTGG
TTGGCCAAGT TCCCTGCCAG GGGCGACACG CTCGATGTAG CACGAGCCGA ATCTTGCACC
CTGGAGCTGG CCAGGCGGTG CGGCTTGACC GTGCCTGAAG TGAAATACCA GGACATCGGG
GGGCGGCCCG TGATGCTCAT TCGCCGGTTC GACCGTTACT GGGCCGCCGC TGGCCAGGCG
CCTGCGGCAG GCACGGCGCT GCATGACACC CGCCCTGATG GTGGGCTCAT GGAAGGCAGG
CTTGCGTTTG TCAGCGGCCT CACGCTGGTC GGCTGCAGCG AGTTCGAGTC TCGCACCAAA
GGCTATCACG ACCTGGCGCA CGCCATTCGC CAGTTCGCGC ACCCGCAATC GATCCGCAAA
GACTGCGAAG AGCTTTTCAC CCGGATGGTG TTCAACATCT TCGTGAGCAA CGACGACGAC
CACTTAAGAA ACCACGGGTT CGTGCATTCC CCGCATCTGG CCGGCTGGGT GCTCAGTCCG
CTTTACGATG TCGTTCCGCG CCCGAGTCTC GCCTATGAGC GCATGCTGCA TTTGCAAGTC
GGCACCGAGG GAAAGCTCGC CAGCCTGGAC AACGCAATGA CCCACTTTGC CGCCTTCACT
CCCGAACGGT CCCGGGCGCT CGCCCTCATC CGGCAGGTCT GGGGCGAGGT GCGACAGTGG
AGGACGTGTT TTGAGGAATT CGCGGCGAAC GGCAAGCTCA TCGACCAGAT CGGTTCCGCG
TTTCGGGATC TGGAGGACAT TGCAAGCCCA GCGCTGGTTG CGCAGATTCG CAAGCCGGAC
TGA
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| Protein sequence | MARQVRELYV FASIAKKAGP RFVPAGLLTL TEDLGAGARS RELASRFSYG TRYLQRLEAI
EIDPVSLSIP DRKAAIGQEF FPANGLEEFG GIRDAAPDAW GRRVIEARRR VPANSLAEAD
YLLQAGGDRV GALDIRADST SPDSPSASDM RSLGYVLQAA DRVDQGLPVP ASLEDYLGAG
PSAGGARPKA SVRDDDGALW LAKFPARGDT LDVARAESCT LELARRCGLT VPEVKYQDIG
GRPVMLIRRF DRYWAAAGQA PAAGTALHDT RPDGGLMEGR LAFVSGLTLV GCSEFESRTK
GYHDLAHAIR QFAHPQSIRK DCEELFTRMV FNIFVSNDDD HLRNHGFVHS PHLAGWVLSP
LYDVVPRPSL AYERMLHLQV GTEGKLASLD NAMTHFAAFT PERSRALALI RQVWGEVRQW
RTCFEEFAAN GKLIDQIGSA FRDLEDIASP ALVAQIRKPD
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