Gene Pnap_4317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4317 
Symbol 
ID4685341 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008757 
Strand
Start bp226289 
End bp227317 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content51% 
IMG OID639826176 
Producthypothetical protein 
Protein accessionYP_973341 
Protein GI121582899 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.450862 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGATC AATCTGGAAA TCTCTCTCTT CTCATTATTG ATGACGATGC GAGAGAAGTG 
TTCGAGAAAA AGTCCAACTT TCAGTTGGAT CTTCTCTCCG GCTCCGTTAA AAAAGCTATG
AATGGCGCCA AGTCTTCGGA CTTGTGGATG TGCCCGATTG ATGACATTGT CATCATGGAG
GGCTTCAATG TCCGCTCGGA AACGGCGCAG TATAGGGAAA AGGTCGAGAA ATTGGCCAAT
TCAATCATTG AAAATGGATT TTATAAATCC AAGCCGCTAG CGATATTCGT AGGCGTGGAT
GCCGAAGGCA AAAACGTCAA TTACCTTTAC GACGGTCACC GTCGATACGC GGCCGCCAAG
CTTGCGATTT CCAGGAACTT CGAACTTCCG AACCTACCCT GCGTAACTTC GCCAGCCGGC
ACATCGCTGG AAGATCTAAC CATTGCCATG GTTACGATGA ACGATGGCGA TCCAGTTGAC
CCGTTTGGAG TTGCCATAGT CTGCAACCGA ATGATAAAAG GTGGTACGCC GATTGAAGAA
ATCGCCAGGC GACTGATGCT TTCACCGACT TATGTGAAAG ACCTGCTCAC TATGATGGCT
GCACCCCGGG CCCTTCGCAA CCTGGTTAGT GAAGGGCACG TGTCCGCTAC GCTGGCCATT
TCCACCATCA AGAAGCACGG TACTTCGGCA CCGGCGGTCT TGCAGGAGGG AGTTGAAAAA
GCCAAAGCGC AGGGTAAAAC CCGCGTGACC GGCAAGACGC TCGCTCCAGA AAAAGTCAAA
ACCATCAAGC CGGAAAAACG CGATCTGCTT CAGGTCGCAA CCGACTGGCT AGCACGAAAT
GCGGACCTCG CAGACAAGGA CAAGCGCGTT TTCGAACTCG CCGCCTTGCT GTGTGAAGTT
AGCCCCAATG AAGTTGAAGG ACGGTATGCG TTCAAGCTGA AAGACGGCGC GCAACCTGAC
GCTACAAACT CACCGGCAAA GTCTTCTGGT AAAGAACAAC TGGCGCTCGC ACCGGAAATT
CTCACTTGA
 
Protein sequence
MNDQSGNLSL LIIDDDAREV FEKKSNFQLD LLSGSVKKAM NGAKSSDLWM CPIDDIVIME 
GFNVRSETAQ YREKVEKLAN SIIENGFYKS KPLAIFVGVD AEGKNVNYLY DGHRRYAAAK
LAISRNFELP NLPCVTSPAG TSLEDLTIAM VTMNDGDPVD PFGVAIVCNR MIKGGTPIEE
IARRLMLSPT YVKDLLTMMA APRALRNLVS EGHVSATLAI STIKKHGTSA PAVLQEGVEK
AKAQGKTRVT GKTLAPEKVK TIKPEKRDLL QVATDWLARN ADLADKDKRV FELAALLCEV
SPNEVEGRYA FKLKDGAQPD ATNSPAKSSG KEQLALAPEI LT