Gene Pnap_4298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4298 
Symbol 
ID4685206 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008757 
Strand
Start bp203487 
End bp204332 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content55% 
IMG OID639826157 
ProductUBA/THIF-type NAD/FAD binding protein 
Protein accessionYP_973322 
Protein GI121582880 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0476] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.232236 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACATA AAGTTCATCC AGAGCTTATC CGGCGTGCGA TTAACGTGGT CGTGATAGGC 
GCCGGTGGAA CGGGCAGCCG CGTGATAGAA GGGCTGGCTT GTCTGCACCG CGCCATCAAA
GCCAAGGGTC ACCCCTTTGG CCTGAAGGTG TCGGTCATCG ATCCGGACAC CGTCTCGGAG
GCAAATGTCG GGCGTCAAGC TTTCTATCCC TGCGATGTGG GGCATTCGAA GGCGCATACG
CTGGTCAACC GGGTGAACAT GGCATTGAAC GGTGAAGCGG TATGGACCGC ATACTGTGAG
ATGGTCACAC TTCAAACAGA TTTGTCCAGT GCCGATATTG TCATTGGCGC TGTAGACAAC
CGCAAGGCTC GTCTGGCGAT CCTGAGGTCG CTTGAGAATG TCAGTTCGGG CAACCGGTAC
TGGCTGGACC TGGGGAACCG GATATCGGAT GGCCAGGTGA TTTTGGGTGA GGTTACTTCG
CGCAAGCGAA AAACTGACGA CCCAGAGCGC CTGCCCCATG CCGGCGAACT GTATCCAGAG
CTGATTGATC CGGCAATGGA GCCTAGCGAT GATGTACCGT CATGCTCGCT GGCCGAAGCG
CTGGAAAAGC AGGCTTTGTT CATCAATCCT GCGGTTTGCG TTCAAGCTAT GAATTTACTG
TGGCTCTTGC TGACCAAGGG TGAGCTTGAG ATTCACGGTG CGTTCATCAA CCTGGAGTTT
GGAACCGTGT TACCGCTTCG AGTCGATCCC CAACAATGGG CGAGATTCGG TGTGGTACGT
AACGGAAAAA GACAAAAGGT TGTTCGGCCT TCTGCGCAGA AAATAAAGGC GGCTGCTACT
GCGTGA
 
Protein sequence
MKHKVHPELI RRAINVVVIG AGGTGSRVIE GLACLHRAIK AKGHPFGLKV SVIDPDTVSE 
ANVGRQAFYP CDVGHSKAHT LVNRVNMALN GEAVWTAYCE MVTLQTDLSS ADIVIGAVDN
RKARLAILRS LENVSSGNRY WLDLGNRISD GQVILGEVTS RKRKTDDPER LPHAGELYPE
LIDPAMEPSD DVPSCSLAEA LEKQALFINP AVCVQAMNLL WLLLTKGELE IHGAFINLEF
GTVLPLRVDP QQWARFGVVR NGKRQKVVRP SAQKIKAAAT A