Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_4184 |
Symbol | |
ID | 4685165 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008757 |
Strand | - |
Start bp | 58305 |
End bp | 59330 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639826045 |
Product | helix-turn-helix domain-containing protein |
Protein accession | YP_973210 |
Protein GI | 121582768 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.26598 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.842889 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCACATCA CAAACGTACG CGTCACTTAT CTTCGGCAAA TCGCGGATCA GGCGGTTGAG CTTGGCGTCG ATTTGGCTGC GTGGCTGGCT ATTTCGGAGC TCAAGGAGCG GGATCTGGTC GATGCGACGG CCTTGATTCC GATTGAGAAA CTCGGAGAAC TCGTGACCGC GGCCATCGCT CGGTCAGGGG AGTCAGGCTT CGGGGTGCTA GCCGGTTGTC GTTTGATTCC AGGCAGTCAC GGCATTGTCG GTATGGCGGC TGCGGCAAGC GCCAACATCC GGGAAGCCAT GCAAATCGTC GAGCGTTTAG TCAGCCTCAG AACGGGTGTC ATCGACATTC GGACCCGCGT GGCGAATGGG GCGTTCGAGG TCTTTTTCGA GCCCGTATTG GGTTTGGGCC CTGCAAGCAA CCCGGTGACC GAAATCGCGA TGGTGGCGGT CAAGAATATC GCAGATGACT TGATTCATCA TGGCAGTGCC TGCAGCAGGG TTGGCTTCAG CTTTCCCGAA CCACCTCATT CTGCACTGGC ACGAGATATT TTTGGCTGTC AGGTTCAGTA TGGTCAGAAG TGGTCGGGCT TGTCTTTTGC CCTGTCGGCA GCAGAAGAAG ACGTACCAAA ACATGATGCG CTGGTGCTGG CAGAAGCTGT GCGCATCTGT ACCGATGAGT TCAAGACACT CCGAAGTAAC AAAAGCGCGA GCGCAAGACT GGAGGGTGTT ATTCTTGAGC GCAGCCCTTC ATTTCCAACA CTCACATTCT GCGCGCGGTT GCTTGGCATG ACACCTCGGA CACTGCATCG CCGCCTAATC GAGGAAGGAA CTTCCTACCG AGAAGTCGCT GAGTCAGTCA GGCACCGCAT GGCATTGGAA CTGCTCAGAA AGAAAGTCAC TGTCAAGGAA GTGGCCTATT TACTGGGCTA TACAGAAATA GCAAACTTCA GACGGGCATT CAAGCGTTGG GAAGGTGTGG CACCCTCCGA CTGGTTTGGT CAGAATACAA AACGGGCGGA AAAATTAGCT AAATGA
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Protein sequence | MHITNVRVTY LRQIADQAVE LGVDLAAWLA ISELKERDLV DATALIPIEK LGELVTAAIA RSGESGFGVL AGCRLIPGSH GIVGMAAAAS ANIREAMQIV ERLVSLRTGV IDIRTRVANG AFEVFFEPVL GLGPASNPVT EIAMVAVKNI ADDLIHHGSA CSRVGFSFPE PPHSALARDI FGCQVQYGQK WSGLSFALSA AEEDVPKHDA LVLAEAVRIC TDEFKTLRSN KSASARLEGV ILERSPSFPT LTFCARLLGM TPRTLHRRLI EEGTSYREVA ESVRHRMALE LLRKKVTVKE VAYLLGYTEI ANFRRAFKRW EGVAPSDWFG QNTKRAEKLA K
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