Gene Pnap_4091 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4091 
Symbol 
ID4686688 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp4377906 
End bp4378322 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content70% 
IMG OID639837104 
ProductMerR family transcriptional regulator 
Protein accessionYP_984303 
Protein GI121606974 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID[TIGR02044] Cu(I)-responsive transcriptional regulator 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.903901 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.433272 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCC CCGTGATCGA CAGCGGCCCC TTCAACATCG GCCAGGCCGC CAGCCGCTCG 
GGCGTGTCGG CCAAGATGAT CCGCCACTAC GAATCGCTCG GCCTGCTGCC CGCCGTGCCG
CGCACCGACG CGGGCTACCG GCAGTATGGC GACAAGCAAG TCCACACCCT GCGCTTCATC
CGCCGCGCCC GCACGCTGGG TTTCAGCATG GCCGAGATTG CCGAGCTGCT CAAGCTGTGG
CAAAACCAGC AGCGCGCCAG CGCCGACGTC AAACGCATCG CCCAGGCGCA CGTCGCCGAC
CTGGAGCGGC GCATCGCCGA GATGCAGGCG ATGCGCCAGA CGCTGGCGCA GCTGGCGCAT
TGCTGCGCAG GAGACGACCG GCCCGATTGC CCGATCCTGA GCGGGCTGGC GGAGTGA
 
Protein sequence
MTAPVIDSGP FNIGQAASRS GVSAKMIRHY ESLGLLPAVP RTDAGYRQYG DKQVHTLRFI 
RRARTLGFSM AEIAELLKLW QNQQRASADV KRIAQAHVAD LERRIAEMQA MRQTLAQLAH
CCAGDDRPDC PILSGLAE