Gene Pnap_4082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4082 
Symbol 
ID4689497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp4361859 
End bp4362854 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content66% 
IMG OID639837095 
Producthypothetical protein 
Protein accessionYP_984294 
Protein GI121606965 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAACC TGAACCTGAA CCGCCGCGAC CTGATCAAGG CCGGCGCCGC AGCAGCCTGC 
GCCCTGTGGC TGCCCCACTC GCAGGCCCAG GCGGTCTGGC CCAGCAAGCC GCTGCGGCTG
GTCGTGCCGT TTGCACCGGG CGGAAGTTCC GAGATCGTCG CCCGCGCCGT CGCCAGCGAG
ATGGCCAAGA CCATCGGTCA GAACGTGTTC GTGGACAACA AGCCCGGCGC CGCCGGCAAC
ATCGCGATGC AGGAAGTGGC CAACAGCACC GACGACCACA CCCTGATCCT GGGGCATATC
GGCACCCTGG CCGTCAATCC CTACATCTTC CCCAAGCTGC CCTACGACGC CAACAAGGAC
TTCGTGCCGA TCACGCTGGT CTCCAAGGTG CCGAGCCTGT ATGTGGTGCA TCCCGACCTT
CCGGTGAAAA ATCTCAAGGA GTTCATCGCC TACGCCAAAG CCAAGCCCGG TCAGCTGAAC
TACGGCTCGG CCGGCAACGG CAGCGCCGGG CATCTGGCCT TCGAGTACCT GAAGATGGAG
AGCGGAATCT TCATGGTGCA TGTGCCGTAC CGGGGAACCG GCCCGATGCT GACCGACCTG
ATGGGCGGAC GGCTGCAGGC CGCCTCGGTG GGCGCGCCGG CCCTGCTGGC CTTCATCAAG
GCCGGCAAGC TGCGCTGCAT CGCCACCGGC ACCGCGCAGC GACTGCCCCA GTTGCCTGAC
GTTCCGACGG TCGCCGAGCA AGGCTTCAAG GGCTTCGAGA TGACGCAGTG GTACGGACTG
ATGGCGCCAA GCAAGTGGCC CAAGGCCAAC ATCGCCAGGT TAGAGGCCGA GGCGATCAAG
GCATCGCGCA GCGCTCAGGT CAAGGAAAAA CTGGCCCAGG AAACCGCGCT GGCCGTGGGC
AGCACGGGCG CGGAGTTCGA CGCCTTCATC CGGGCCGAAC AGGCGCGCTG GAAGGCCGTC
ATCGCCCGCG CCCAGATCAA GCCGGACGGC GCGTAA
 
Protein sequence
MNNLNLNRRD LIKAGAAAAC ALWLPHSQAQ AVWPSKPLRL VVPFAPGGSS EIVARAVASE 
MAKTIGQNVF VDNKPGAAGN IAMQEVANST DDHTLILGHI GTLAVNPYIF PKLPYDANKD
FVPITLVSKV PSLYVVHPDL PVKNLKEFIA YAKAKPGQLN YGSAGNGSAG HLAFEYLKME
SGIFMVHVPY RGTGPMLTDL MGGRLQAASV GAPALLAFIK AGKLRCIATG TAQRLPQLPD
VPTVAEQGFK GFEMTQWYGL MAPSKWPKAN IARLEAEAIK ASRSAQVKEK LAQETALAVG
STGAEFDAFI RAEQARWKAV IARAQIKPDG A