Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_4078 |
Symbol | |
ID | 4688519 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 4358323 |
End bp | 4359075 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639837091 |
Product | 16S ribosomal RNA methyltransferase RsmE |
Protein accession | YP_984290 |
Protein GI | 121606961 |
COG category | [S] Function unknown |
COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.708574 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGCGC GCTTTTATGC CGACGTGGCG CTCGCCGCCG GAACGTCCAT CAGCCTGCCC GAGCAGACTG CCCGCCATGT GCAGGTGCTG CGCCTGCAGC CGGGCGAGCG CATCACGCTG TTCAACGGCC GGGGCGACAC TGAAGGCGAA TTCGACGCCA CCGTCGAGCG CATGGGCCGC AGCGACGTGG ACGTGACCAT CGGCGCCTGG ACTGCCACCG CGCGCGAGGC CGCGCGCACC ATCCACCTGG TCGTCGGCAT GCCGGCCAAC GACCGCATGG ACTGGCTGAT CGAAAAAGCC ACCGAACTCG GCGCGGCCAG CATCCAGCCG GTGATGAGCG AGCGCAGCGT GCTGCGCCTC AAGGCCGAGC GCGCCGACAA GAAGGTCGCG CACTGGCGCG GCATCGCCAT CGCATCGAGC GAACAGTGCG GGCGCAACCG GGTGCCGCTG ATTCACGACG TGGCGACGCT GGGCGAATGG CTGAAGAAAA GCACGGCGGA AACCGGCGCC GCCGCCAGCA ACGGCATGCG GCTGCTGCTG TCGCTGCAGG ACGGCAGCAG GCCGCTGGCT GAAGCCGTCG CCAGCACCGC ACTGGCCTCC TTCACGTTTC TCAATGGCCC GGAAGGCGGC CTGAGCCCGG CCGAGGAAGC CGCCGCCCTT GCCTGCGGCT TCAGCCCGGT CACGCTCGGG CCGCGCGTGC TGCGCGCCGA AACCGCGCCG CTGGCCGCGC TGGCCACGCT GCTCTGTTAT TAA
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Protein sequence | MSARFYADVA LAAGTSISLP EQTARHVQVL RLQPGERITL FNGRGDTEGE FDATVERMGR SDVDVTIGAW TATAREAART IHLVVGMPAN DRMDWLIEKA TELGAASIQP VMSERSVLRL KAERADKKVA HWRGIAIASS EQCGRNRVPL IHDVATLGEW LKKSTAETGA AASNGMRLLL SLQDGSRPLA EAVASTALAS FTFLNGPEGG LSPAEEAAAL ACGFSPVTLG PRVLRAETAP LAALATLLCY
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