| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4067 |
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| Symbol | |
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| ID | 4688990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 4340848 |
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| End bp | 4342071 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639837080 |
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| Product | diaminopropionate ammonia-lyase |
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| Protein accession | YP_984279 |
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| Protein GI | 121606950 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1171] Threonine dehydratase |
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| TIGRFAM ID | [TIGR01747] diaminopropionate ammonia-lyase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACAGCC TTCCAAGCAT TTCAACCGAC TACTTTCTCA ACCCGGCGTT CCAGCGCGAG
GAGCCCTATG GCGAGCAGCG CGCCAGCATT CTCAACGCCG GCGCGCTGGC CAGTGCCGGG
CAGGAAATCA CCGCCTGGCC CGGCTACCAG GTCACGCCCC GGCATTCGCT GGGCGGCCTG
GCCGATGCGC TGGGCGTGGC CTCAATCAAT TACAAGGACG AAGGCTCGCG CTTCGGCCTG
GGCAGCTTCA AGGCCCTCGG GGGCGCCTAC GCGGTCGGCC GGCTGCTGTG CCGCGTGCTG
GGGCAGCAGT TGGGCCGGGT CGTGAACCCG TCCGACCTGC TGCAGGGCGA GTTGCGCCAG
GCCGCCTCAA GCATCACGGT GACCTGCGCC ACCGACGGCA ACCATGGCCG GTCGGTGGCC
TGGGGCGCGC AGCTGTTCGG CTGCCGCTGC GTGATCTACA TTCACGCCTC GGTCAGCGAC
GGACGCAGGC AGGCCATCGA ACGCTATGGC GCGCAGGTGG TGCGCACCGA AGGCAACTAC
GACGACGCCG TGCGGCAGGC CGACCGCGAC GCCCGGGCCA AGGGCTGGCA CGTCATCTCC
GACACGTCCT ACCCGGGCTA CATGGACGTT CCGCGCGACG TCATGCAGGG CTACCAGCTG
ATGGTCCAAG AGGTCGTCCA GCAGCTGGGC GCCTGGCCGA CGCATGTCTT CGTGCAAGCC
GGCGTGGGCG GATTTTCCGC AGCCGTCTGC GCCTATTTCT GGGAGCGCGA CGCGCAGCGG
CGGCCCTTCT TCACGGTGGT GGAGCCGACC CGCGCCGACT GCCTGCTGCA AAGCGCGCGC
AACGGCCGCA TCACGGCGGT CACGGGCGAG CTGGACACGC TGATGGCCGG CCTGGCCTGC
GGCGAGGTGT CGCTGCTGGC CTGGGACATC CTGGAACGCG GCGCCAACGC CTTCTGCACC
GTGGACGACG ACGCGGCCGT AGCGGTGATG CGGCTGCTGG CGCATCCGCC ACGGAACGAC
GCCGCCATTG TGGCCGGTGA ATCGGCCGTG GCCGGGCTGG CTGCGGCGAT CGGCATCGCC
AGCAACCCCG AAGCCCGGGC CGCGTTCAGA ATCAATGCCG AAAGCCGGAT TCTGTTCTTT
GGCAGCGAAG CCGACACGGA CCCGGCGCTT TACCGGCAGC TGGTCGGCGC CAGCGCGGCC
GACGTCCTCG AGACGCAGGC ATGA
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| Protein sequence | MHSLPSISTD YFLNPAFQRE EPYGEQRASI LNAGALASAG QEITAWPGYQ VTPRHSLGGL
ADALGVASIN YKDEGSRFGL GSFKALGGAY AVGRLLCRVL GQQLGRVVNP SDLLQGELRQ
AASSITVTCA TDGNHGRSVA WGAQLFGCRC VIYIHASVSD GRRQAIERYG AQVVRTEGNY
DDAVRQADRD ARAKGWHVIS DTSYPGYMDV PRDVMQGYQL MVQEVVQQLG AWPTHVFVQA
GVGGFSAAVC AYFWERDAQR RPFFTVVEPT RADCLLQSAR NGRITAVTGE LDTLMAGLAC
GEVSLLAWDI LERGANAFCT VDDDAAVAVM RLLAHPPRND AAIVAGESAV AGLAAAIGIA
SNPEARAAFR INAESRILFF GSEADTDPAL YRQLVGASAA DVLETQA
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