| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4056 |
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| Symbol | |
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| ID | 4689652 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 4330644 |
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| End bp | 4332689 |
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| Gene Length | 2046 bp |
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| Protein Length | 681 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639837069 |
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| Product | transketolase |
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| Protein accession | YP_984268 |
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| Protein GI | 121606939 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0021] Transketolase |
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| TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAAAA ACGAAATGAT GGCGAATGCG ATACGCGCAC TCGCAATGGA CGCCGTACAA
CAAGCCAATT CGGGTCATCC CGGCGCCCCC ATGGGCATGG CCGACATGGC CGTGGCCCTC
TGGGGCGACC ACCTCAGGCA CAGCCCCGCC AATCCGCACT GGATGGACCG CGACCGCTTC
GTGCTGAGCA ACGGCCATGC GTCGATGCTG ATTTACGCGG TGCTGCACCT GACCGGCTAC
CCGCTGCCCA TCAGCGAACT GAAGAACTTC CGCCAGTTCG GCTCCAAGAC CCCCGGCCAC
CCGGAAGTGG ACGTGACCCC AGGCATCGAG ACCACCACCG GCCCGCTCGG CCAGGGCCTG
ACCAATGCGG TCGGCATGGC GCTGGCTGAA AAGCTGTTGG CCAAGGAATT CAACCGCGAA
GGCCACACGG TCGTCGGCCA CAACACCTAC GTCTTCATGG GCGACGGCTG CCTGATGGAA
GGCATCAGCC ACGAGGCCGC TGGTCTGGCC GGCGCCTGGA AGCTGGACAA GCTGATCGCG
CTGTACGACG ACAACGGCAT TTCCATCGAC GGCCAGGTCG AGCCCTGGTT CATCGACAAC
ACCGCGCAGC GCTTTGCCGC CTACGGCTGG AATGTGATCG GCCCGGTTGA CGGCCACGAT
GCCGAAGCCG TGTCGGCCGC GATTGCCGAG GCCAAGAAGG CGTCCGGCAA GCCGTCGCTG
GTCATCTGCA AGACCCATAT CGGCAAGGGC TCGCCGAACC GCGCCAACAC CGCCAAGGCG
CACGGCGAAC CGCTGGGCGC CGAGGAAATC GGCCTGACCC GCACCGCGCT CAACTGGCCG
CACACGCCCT TCAAGATTCC CAAGGACAGC ATGGCAGCCT GGGACGCCAA GGCCCAGGGC
CGCAAGCTCG AGGCCGAATG GGACAAGACC TTCGCCGCCT ACAAAAAGGC GCATCCCGAA
CTGGCGGCCG AATTCGTTCG CCGCATGAAG GGCGAGCTGC CCAGGAGCTT TGCGCAACTG
GCCGTCGATA CCGTCGTCGG CGCGCACACC CGGGCCGAGA CCGTGGCCTC GCGCAAGGCG
TCGCAGCTGG CGCTCGAATC CTTCACCGCC GGCCTGCCCG AGCTGCTGGG CGGCTCGGCC
GACCTGACCG GCTCGAACCT GACCAACACC AAATCGACCC CGAGCCTGCG CTTTGACGCG
AATGGCGACG TGGTGCAGAT CGAGGCCGCC AACGGCAGCC TGGTCGGCGG GCGCCACATC
AACTACGGCG TGCGCGAGTT CGGCATGGCC GCCATCATGA ACGGCGTGGC GCTGCATGGC
GGCTTCATCC CCTACGGCGG CACTTTCCTG ACCTTCAGCG ACTACTCGCG CAACGCCATC
CGCATGGCCG CGCTGATGAA GCTGCGCGTG GTGCATGTGT TCACGCACGA CTCCATCGGC
CTGGGCGAAG ACGGCCCGAC GCACCAGTCC ATCGAGCATG CCGCCAGCCT GCGCCTGATT
CCGAACCTCG ATGTCTGGCG TCCGGGCGAC ACCGCTGAAA CCGCCGTGGC CTGGGCCGTG
GCGCTGGAAA ACAGGACCCG GCCGACGGCC TTGCTGCTGA GCCGCCAGAA CCTGCCGTAT
GCGCCGAAAG GCGATGTCGG CCAGATCAGC AAGGGCGCTT ACGTGCTGGC CGAGCCCGAA
GAAGTCGGCC TGAAGAAAAA GGCGCAGGCC GTCATCATTG CCACCGGCTC CGAAGTGCAG
CTGGCGCTGA AGGCGCAGGA ACTGCTGGCC GCCCAGAAGA TCGCGGTGCG CGTGGTGTCC
ATGCCCAGCA CGACCACATT CGACCGCCAG GACACGGCCT ACAAATCGAA AATCCTGCCC
GAAGGCCTGC CGCGCATCGC GGTGGAAATG GGCGTGACCG ACGGCTGGTG GAAATACGGC
TGCGCGGCGG TCATTGGCAT CAACACCTTT GGCGAATCGG CCCCGGCCGC CGTGCTGTTC
GAGCATTTCG GCTTCACGCC AGCCAATGTG GCCGCGACCG TGCGCAAGGT TCTGCGCAAG
AAATAA
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| Protein sequence | MAKNEMMANA IRALAMDAVQ QANSGHPGAP MGMADMAVAL WGDHLRHSPA NPHWMDRDRF
VLSNGHASML IYAVLHLTGY PLPISELKNF RQFGSKTPGH PEVDVTPGIE TTTGPLGQGL
TNAVGMALAE KLLAKEFNRE GHTVVGHNTY VFMGDGCLME GISHEAAGLA GAWKLDKLIA
LYDDNGISID GQVEPWFIDN TAQRFAAYGW NVIGPVDGHD AEAVSAAIAE AKKASGKPSL
VICKTHIGKG SPNRANTAKA HGEPLGAEEI GLTRTALNWP HTPFKIPKDS MAAWDAKAQG
RKLEAEWDKT FAAYKKAHPE LAAEFVRRMK GELPRSFAQL AVDTVVGAHT RAETVASRKA
SQLALESFTA GLPELLGGSA DLTGSNLTNT KSTPSLRFDA NGDVVQIEAA NGSLVGGRHI
NYGVREFGMA AIMNGVALHG GFIPYGGTFL TFSDYSRNAI RMAALMKLRV VHVFTHDSIG
LGEDGPTHQS IEHAASLRLI PNLDVWRPGD TAETAVAWAV ALENRTRPTA LLLSRQNLPY
APKGDVGQIS KGAYVLAEPE EVGLKKKAQA VIIATGSEVQ LALKAQELLA AQKIAVRVVS
MPSTTTFDRQ DTAYKSKILP EGLPRIAVEM GVTDGWWKYG CAAVIGINTF GESAPAAVLF
EHFGFTPANV AATVRKVLRK K
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