Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_4041 |
Symbol | |
ID | 4687317 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 4307485 |
End bp | 4308480 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639837054 |
Product | TRAP dicarboxylate transporter, DctP subunit |
Protein accession | YP_984253 |
Protein GI | 121606924 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGCCA TCCGTTTCAC CCTCATCGCG GCGCTCGCGG CCTTCGCCGC CAGCGCAGTC GCGGCGCATG CCGGACCAAT CACCCTGACG TTCTCCCATG GCACCCCGAC CACGCACCCG GAGCATGTGG CGGCGCTGCA GTTTGCCAGG CGTGTCGAAG AGCGCACCCA TGGGCAAATC AAATTCGCGA TCTTTCCGGC GGGTCAGCTC GGCAGCGAAA ACGAAGTATT GGAGAAAGTC CGGCTCGGCG CGCTCGACAT GGCCGCGTCC ACGCAGAACT ACCTCATCAA GTACGAAAAG GCCTTCGCGG TCATCACCAT GCCCTATGTA TTCGACAACT ACGCGCATGC GCACCGGGTG CTCGACGGCC CGGCGATGGC CTGGCTCGCC CCGCTGGCCA AGAAGCAGGG TTTCGTCATG CTGTCCAACT GGGAATGGGG CTTTCGCAAC CTGACCAACA ACCAGCGTCC GATCAACCAG CCCGGGGATG TGCGCGGCCT GAAAATACGC GTGCCACCCG TGCTGGGGCT TGAGGCCACC ATGCAGGCGC TGGGCGCGCA GATCAGCAAG ATCAGCTTCA AAGACCTCTA CGCAGCGTTG TCGCAAGGAC GGGTCGATGG CCAGGAAAAC CCGCTCAACG TGATTTATTA CAACAAGCTG TACGAGGTGC AGAAGCACCT CGCGCTGACG CGGCATGTTT ACTACAACCA GGTTCACCTC ATGGGCGCCA AAAGCTGGGC CAGGCTCACG CCGGCGCAGC AAACCATCGT GCGCGAAGAA AGCAAGGCGG CAGGCGACGG CGCGCGCAAG GCCATCATTG CCGAAGAGGA CGAGCTGATC GCCAAAATGG CCGCTGCCGG GGTGAAGGTC ACACGCCCCG ACCCCCAGCC GTTCCGCGCC ATGATGGAGC CCGCCCACCA AAAGATCAAA CTCCTTGCCG GCGAAGAGAA CGCACGCAAG TTCCTGAACA TGGTCGCGGA TGAACGCCGG CCATGA
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Protein sequence | MQAIRFTLIA ALAAFAASAV AAHAGPITLT FSHGTPTTHP EHVAALQFAR RVEERTHGQI KFAIFPAGQL GSENEVLEKV RLGALDMAAS TQNYLIKYEK AFAVITMPYV FDNYAHAHRV LDGPAMAWLA PLAKKQGFVM LSNWEWGFRN LTNNQRPINQ PGDVRGLKIR VPPVLGLEAT MQALGAQISK ISFKDLYAAL SQGRVDGQEN PLNVIYYNKL YEVQKHLALT RHVYYNQVHL MGAKSWARLT PAQQTIVREE SKAAGDGARK AIIAEEDELI AKMAAAGVKV TRPDPQPFRA MMEPAHQKIK LLAGEENARK FLNMVADERR P
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