Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_3970 |
Symbol | |
ID | 4687941 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 4236402 |
End bp | 4237598 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639836987 |
Product | NnrS family protein |
Protein accession | YP_984186 |
Protein GI | 121606857 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3213] Uncharacterized protein involved in response to NO |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0693479 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCACAAC CCATCCAGAT CAAGAACCCG TCAGTGGTCC CGGCCGCGCC GCCGCCTGGC TTTGCGCTGT GGGAACTCGG CTTTCGCCCG TTTTACCTGC TGGCCAGCGT GTTTGCCGCG CTGTCGATCG GCCTGTGGGC GCTGCAGTTT GCCGGCTGGC TGGGCCAGCC CTACCTGGCC GGGCCGATGT GGCATGCGCA CGAAATGCTG TTCGGCTTCA CGCTGGCCGT CGTGGTCGGT TTTCTGTTCA CCGCCGGGCG CAACTGGTCG GGCCGGCCGA CGCCGACCGG CGTGCCGCTG ATGGCGCTGG CCGCGCTCTG GGTCGCCGGG CGGGTGCTGG TGTTGACGCC CTTCGGCTGG GCCGCCGCCG TCGCCAACGT GGCTTTTCCG CTGGCAGCGG CCGTCGGGCT GGCGATTCCG TTCATTGCCG CGCGCAACCA GCGCAACTAT TTTTTCATCG GCCTGCTGCT GCTGATGGCC GCTGCCGTGC TGGGCGTTCA CCTGGCGCAA CTGGGCGCGG TGCAGCTGCC CGGCTGGATC GGCATCCAGG TGGCGCTGGA CGTCGTGCTG TTCATCATGG CGGTGATGGG CGGGCGGGTG ATTCCGATGT TCACCAACAG CATTCCGGGC GTCAAGGCAA TCAAGCGCGC CTGGCTGGAA AAAGCCGCGC TCGGCTCCAG CCTGGCGCTG CTGCTGGCCG ATGTGCTGCC GCTGCACGGC TTGCCGCTGG CCTTGCTGGC CGGGTTCTGC GCAGCCGCGC ACCTGGCGCG TTGGGCGCTG TGGCAGCCGT GGAAAACCCG CCGCACGCCG CTGGTCTGGG TGCTGCATGT GGCCTATTTC TGGATTCCGG TGCATCTGGC GCTGCGCGGC CTGGCCGAAA TGGGCTGGGT CGCGCCATCC ATCGCCATCC ATGCGCTGAC GGTGGGCGCC ATCGGCGGGC TGGTCATCGG CATGATGACG CGCACCGCGC TGGGCCACAC CGGCCGGCCG CTCAAGGCGG GCCGCGCCGA CGTGGCCTGC TACCTGCTGG TGCTGGCGGC GGCGCTGGTG CGGGTGCTGG TGCCGCTGCT GGCGCCGGCG CAGCTGGTGA ATGCCGTGAT CGGGTCCGCT GCGTTGTGGT CGGGCGGCTT TGCGCTGTAT GCGGTGGGCT ACTGGCCGGT GCTGACGCGC GTTCGGGCTG ACGGCAAGCC GGGCTAA
|
Protein sequence | MSQPIQIKNP SVVPAAPPPG FALWELGFRP FYLLASVFAA LSIGLWALQF AGWLGQPYLA GPMWHAHEML FGFTLAVVVG FLFTAGRNWS GRPTPTGVPL MALAALWVAG RVLVLTPFGW AAAVANVAFP LAAAVGLAIP FIAARNQRNY FFIGLLLLMA AAVLGVHLAQ LGAVQLPGWI GIQVALDVVL FIMAVMGGRV IPMFTNSIPG VKAIKRAWLE KAALGSSLAL LLADVLPLHG LPLALLAGFC AAAHLARWAL WQPWKTRRTP LVWVLHVAYF WIPVHLALRG LAEMGWVAPS IAIHALTVGA IGGLVIGMMT RTALGHTGRP LKAGRADVAC YLLVLAAALV RVLVPLLAPA QLVNAVIGSA ALWSGGFALY AVGYWPVLTR VRADGKPG
|
| |